Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0402 |
Symbol | |
ID | 4205941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 487046 |
End bp | 489064 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642564959 |
Product | hypothetical protein |
Protein accession | YP_697731 |
Protein GI | 110803962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.813066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATT ATTCTAATAA AATAGAGGAA TTAAAAGCAA AGATTAATAA ATACATGCAA GGATATGATA CTGAGTTTGT AAGGTACTAT ATAAATCATA ATTGCAAGAA AGAGATAGAT AAAAAGTTAA TAGGTGCTAA TTTAATTCTT AATAATTCTT TTATATTCGA TGATGAATGG GATATGGAAC AATGTAAAAT TCCATATTTA AATAGAAATT TAGATTGGAA CTTTACTCCT AATGGAGATG AGGAATGGGT ATTTATGCTT AATAGACATG AATACTTTGA AAAATTAATT GCATCCTATT ATTTTAGTAA TGATGAAAAA TATTTAGATA AGTTAAAGGA ATTAATATTT AATTGGATTG AAAATAATGA GATAAAAGAG TGTGGAGGAC CAACAATAAG AACAATAGAT ACTGGAATAA GATGTTTTAG TTGGATTAAG TCTCTTTTAC ATTTAATTCA TGAAAATAAG TTAGAAGATG AAGAAATATT AAAAATAATT TTTAGTATAA AAGAACAATT AGAGTATTTA AAAAAATCTT ATATTGATAA ATATGTTCTT AGTAATTGGG GAGTATTACA GACAACAGCA ATCATTACTT GCTCCTTATG GTTAAAGGAC TTTATAGAGG ATGAAGAATT ATATAAATGG GCCCTTGAGG AACTATACAG GGAAATAAAT CTTCAAGTTT TAGAAGATGG TTCACATTGG GAGCAGTCTG TAATGTATCA TATTGAAGTA CTAAATTATT CTATGGCAAC TATACACTAT GTTAAGTATT TTAATGTTGA TTTAGATGAG GAGTTCTTAG AAAAAATACA TTCTATGGCT AAATATTTAG TTTACTGTGG AGATTCAAAT TCAATTCAAG TTGCTCAAGG GGACAGTGAC AGAAGTGATA TTAGAGATGT TCTTCTTAGG GCATCTATAT TATTTAATGA TCCTCATTTA AAATTTAGAG CATATGAAAC TATGGATTTA ACCAGTATAT TATTGTTTGG AAGAGATGGA TTTTTAAAAT ATACAAATAT GGATGCAGAG GAAATTACAA TGCTTAATAA GTCCTTTATA GACTCTGGTA ATATTTATAT AAGAAGTGGA TGGGACAAAG AGGCAAGTTT TACTTATTTA CAAAATGGTA CTCTTGGAAG TGGACATGGA CATTCAGATT TATGCCATTT TTCAATTCAT TATGGTGGAG AACCATTTTT AATAGATTCA GGTAGGTATA CCTATGTTGA AAGTGATTTT TTAAGGGAAT ATTTAAAATC TGTTAAAGCT CATAATGTAT CTATAATTGA TGATTCTCCT TTTGCTATTC CTAAGAATTC ATGGAAATAT AATAAATATC CAGATGTTAT GAAAAATTAT TTTAATGAAA AAGATAATAT AGCTTATGCT GAAATGGCTT ATTTAGCAAC TTTAAGTGAT GGAACACCAT ATACGGTTAT TAGAAAGGTG TTAGTTATAT CTCCAGATAT ATGGGTAATA GTTAATGATA TAAGGTGCAG TGGAAAGCAT ATATGCAAAA ATTATTATAA TTTAGATTAT AAGGTTAAGG TGATTAAAGA AGAGGGTTAT TTTAGATGTG TAAATAAAGA AAGTGAAATT AAGATTTATA ATAACAATGT AGATAAGAAA TATATAGAAA ATACTTTAAT TTCAACAAAT TATAATAGTA TAAATAATAG TAAAAAGATA GTAACACAAT GTACTTTTGA AAATAATTTT GTGAACTATG ATATAATTTT AGGGCAGAAT TTAAAAAGTA TAGAAATAAA GGATCCTAGT ATTGTACAAT ATAATTCAAA AGAAAAGATT AATACAAGTG TGGCAATAAC TAAAGAATTT GTAATAAATG AAAATGAGAG TTATACTATT ATAATATTTA ATAAAGAAAC ATTTAAAGGG GCTAAGGTGT ATATATATGA CTCTTTGGTT TTATATGGTA AGGTTATTGT TGTGCATAGA TTTAAAGACG AGAGAGAAAT AATTCGTTTG AAAGCATAA
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Protein sequence | MSNYSNKIEE LKAKINKYMQ GYDTEFVRYY INHNCKKEID KKLIGANLIL NNSFIFDDEW DMEQCKIPYL NRNLDWNFTP NGDEEWVFML NRHEYFEKLI ASYYFSNDEK YLDKLKELIF NWIENNEIKE CGGPTIRTID TGIRCFSWIK SLLHLIHENK LEDEEILKII FSIKEQLEYL KKSYIDKYVL SNWGVLQTTA IITCSLWLKD FIEDEELYKW ALEELYREIN LQVLEDGSHW EQSVMYHIEV LNYSMATIHY VKYFNVDLDE EFLEKIHSMA KYLVYCGDSN SIQVAQGDSD RSDIRDVLLR ASILFNDPHL KFRAYETMDL TSILLFGRDG FLKYTNMDAE EITMLNKSFI DSGNIYIRSG WDKEASFTYL QNGTLGSGHG HSDLCHFSIH YGGEPFLIDS GRYTYVESDF LREYLKSVKA HNVSIIDDSP FAIPKNSWKY NKYPDVMKNY FNEKDNIAYA EMAYLATLSD GTPYTVIRKV LVISPDIWVI VNDIRCSGKH ICKNYYNLDY KVKVIKEEGY FRCVNKESEI KIYNNNVDKK YIENTLISTN YNSINNSKKI VTQCTFENNF VNYDIILGQN LKSIEIKDPS IVQYNSKEKI NTSVAITKEF VINENESYTI IIFNKETFKG AKVYIYDSLV LYGKVIVVHR FKDEREIIRL KA
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