Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0389 |
Symbol | |
ID | 4204600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 474429 |
End bp | 475280 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564946 |
Product | hypothetical protein |
Protein accession | YP_697718 |
Protein GI | 110802409 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCAGG TAGTCTATAG AATTACTGCT ATAATTCTTT TTGGGGCTTT AGCTGGAATC GGGGTTAACT TTTTCTTAAC ACCTGCACAT ATTTATTCAT CAGGTGTTAC AGGAATATCA CAGCTATTAT CATCTATTGG TGGAGATTTT TTTAATATAA ACATTGACAT TTCAACATGG GTTTTAATTT TAAATCTACC ACTTGCGTAT TTATCATTTA GAAAATTAGG AAAGAAATTT ACACTTTATA GTTTTCTTTC TATAATTTCA TTATCATTTT TTATAGGGAT TATTCCAACA AGAGCTGTTA CTAATAACCA ACTTTTAAAT TCCATATTTG GAGGAGTTCT TATGGGAGCT GGAGTTGGAA TGTGCTTTAG AGCAGGATTT TCTACTGGAG GTACAGATAT TATAGTTTTA GTTGTTCAAA AAATGACAGG GAAGTCAGTT GGTCAACTAG GATTTATAGT AAATGGAATA ATATTATTAG TTGCAGGATT AGTTTATGGA TGGGAATTAG CTTTGTATAG CTTAGTTTCA ATTTACGTAA CTACTAAGGT TATAGACTTA TTTTACATTC AACAATATAA ACTTACAGTA ACAATTTATA CTAAAAAAGA AAAAGAAATT GTGGATAGTT TAATTAAGAG TCAAATGAGA GGAGTTACAA TTGGTAGAAA TCTTTATGGT GGATATACTA ATGAACCATT AAGCTCAATT ACCACAGTAA TTTCAAAGCA TGAATTATTA ATTGTTAAGA AAAATGTTAT GGATATAGAC CCAGAAGCAT TTGTAAACAT ACAGCCAACT GTTGAAGTTA TGGGTAATTT CTATGATAAT TCATTAATAT AA
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Protein sequence | MYQVVYRITA IILFGALAGI GVNFFLTPAH IYSSGVTGIS QLLSSIGGDF FNINIDISTW VLILNLPLAY LSFRKLGKKF TLYSFLSIIS LSFFIGIIPT RAVTNNQLLN SIFGGVLMGA GVGMCFRAGF STGGTDIIVL VVQKMTGKSV GQLGFIVNGI ILLVAGLVYG WELALYSLVS IYVTTKVIDL FYIQQYKLTV TIYTKKEKEI VDSLIKSQMR GVTIGRNLYG GYTNEPLSSI TTVISKHELL IVKKNVMDID PEAFVNIQPT VEVMGNFYDN SLI
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