| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0388 |
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| Symbol | brnQ |
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| ID | 4204777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 472816 |
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| End bp | 474153 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642564945 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_697717 |
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| Protein GI | 110802488 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TATCAAGAAA AGATTTATTA TTAGTAAGTT TAATGTTATT TTCATTATTT
TTTGGAGCTG GGAATTTAAT TTTCCCACCA TTCTTAGGGC AAGCGGCTGG AAGTTCTACT
TGGATTACTA TTTTAGGATT TTTTGTTACG GCAGTAGGAT TTCCAGTACT AGGGGTAATT
GCTGTGGCGA AATCAGGAGG ATTACATGCA TTAGCAAGTA GAGTAAATCC TGTCTTTGCA
ACGTTTTTCA CAGTTCTTAT CTATATTTCA ATAGGACCTG GCTTAGGGAT ACCTAGAGCA
GGAAGTCTTC CCTTTGAGAT GGCAGTTGCG CCATTTTTAC CAGAAGGACT TATATCTAAT
AATTTAGCAT TATTTTTATA TACTTTTGTA TTTTTTGCAG TTGCATACTG GCTATCTTTA
TCACCAGCAA AGTTAGTAGA TAGAATGGGG AAAGTATTAA CTCCAAGTTT ACTTGTATTA
ATAGGATTAA TTTTCGTAGC AAGTATTTTT AAACCTTTAG GAGCATATGG AGATGTTACA
GGAGTTTATA AAGAGTCACC ATTTATAAGT GGATTTTTAG ATGGGTATAT GACTATGGAT
ACAATAGCTG CCTTAAACTT TGGAATTGTA ATAGCACTTG TAATAAAGTC TAAGGGAGTA
AAAGAAGAAA AATTTGTTGT AAAAACCTCT GTAAAGGCAG GAATAATTGC TGGAGGATTA
TTAATAGTAA TATACTCAAT GCTTGCTCAT CTTGGAGCAA CTAGTGGTGG AAGATTTGGT
TTAACTGAAA ATGGAGCACA AACTCTTAGT AATATAATCA CTTATATTTT TGGAAAACCA
GGAGCTATTT TATTAGCGGT AATATTTACA TTAGCTTGCT TAACAACTTG CGTAGGTCTT
ATTACATCTT GTAGCCAATA CTTTCAAACT TTGACTAAAA AAATAAATTA TCTTTCTTGG
GTTAGAATAT TAACATTAAC AAGTATGGTT TTAGCCAATA TGGGATTAAA TAAAATATTA
GCAGTATCAG TTCCAATTTT AAATGCAATT TATCCTATGG CAATAATGCT TATTGTCTTA
GCAATGTTAG ATAAATATAT AAAAGGAAAC TCAGTAGTAT ATACTACAAC TATAGCATTT
ACAACAATAG TTAGTGTTAT TCACGCTTTA AGTGGTACAG GTATTAATAT AGAATTTTTA
AACAGTATTT TTGAAAATTT ACCTTTCTAT TCAGAGGGGT TAGGATGGAT ATTACCAGCC
CTATTTGGTT TAGGATTAGG TTTAGTTTTA AAATCATTCT TTGAAAAGAA CAAAGAAAAA
GTTTTAGAAG TTAGTTAA
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| Protein sequence | MKDLSRKDLL LVSLMLFSLF FGAGNLIFPP FLGQAAGSST WITILGFFVT AVGFPVLGVI
AVAKSGGLHA LASRVNPVFA TFFTVLIYIS IGPGLGIPRA GSLPFEMAVA PFLPEGLISN
NLALFLYTFV FFAVAYWLSL SPAKLVDRMG KVLTPSLLVL IGLIFVASIF KPLGAYGDVT
GVYKESPFIS GFLDGYMTMD TIAALNFGIV IALVIKSKGV KEEKFVVKTS VKAGIIAGGL
LIVIYSMLAH LGATSGGRFG LTENGAQTLS NIITYIFGKP GAILLAVIFT LACLTTCVGL
ITSCSQYFQT LTKKINYLSW VRILTLTSMV LANMGLNKIL AVSVPILNAI YPMAIMLIVL
AMLDKYIKGN SVVYTTTIAF TTIVSVIHAL SGTGINIEFL NSIFENLPFY SEGLGWILPA
LFGLGLGLVL KSFFEKNKEK VLEVS
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