| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0383 |
|---|
| Symbol | |
|---|
| ID | 4204321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 467936 |
|---|
| End bp | 468988 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642564940 |
|---|
| Product | IS1470, transposase |
|---|
| Protein accession | YP_697712 |
|---|
| Protein GI | 110801472 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATC AAAATCATAA CACAGAGTCA AGAAAAAATA AACACTTAAA TATGAAAGAG
CGTATGATAG TTGAAATACG TCTTAAAGAT GGATTTTCAG CTTATAAAAT AGCAAAAGAA
CTAAATAGGC CTATAAATAC CGTTTTAAAC GAAATACGCC GTGGTACTAC TAAGCAAATT
AAGCAAGGTA AGGAATTTCA TGTGTATTTT GCTGATACTG GTGAAGCTGT TTATAAGAAG
AATCGCTTAA AATCTAATCG TAAATACAAA CTATTAGAAT GTAGTGATTT TATAAAATAT
GTAGTTGATA AAGTTAAGAA TGATCACTGG TCTTTAGATG CATGTGTTGG TGAAGCTCTG
CATTCATCTA GATTTAGTCC TTCTCAAATT ATTTCAACAA AAACGCTTTA TAACTATGTA
GACCTTGGCT TATTACCTAT AAAAAATATA GATTTACCAG CTAAACTTCA TAGAAATAAA
AAGTCTACTA GAGTAAGAAA TAATAAGAAA AAGCTTGGCA CTAGCATTTC AGATCGTCCT
AATTCTATTG AAAACCGTGA AGAATTTGGA CATTGGGAAA TAGACTGTGT ATTAGGTGAA
AAATCTAATA AAGATAAGGT TTTGTTAACA CTTGTCGAGC GTAAAACTAG GTATGCTATA
ATATCTGAAA TGTCTTCCCA TTCAACAATA TCTGTTACAA AGGCTCTTGA TAAGATTAAA
GAATTTTTTG GCAGTAAATT TAGTGAAGTA TTTAAGAGTA TAACTGCTGA TAATGGCTCT
GAATTTGCTG ATTTATCAGA ATTTGAACTA AAAACAAAAA CTAAAGTGTA TTTCACTCAC
CCATATTCTT CATTTGAAAA AGGTACAAAT GAGCGTCATA ATGGACTGAT TAGGCGTTTT
ATCCCGAAAG GAAAACGAAT TTCAGATTAC TCACTTGAAA CTATATCTTT CATAGAAAAT
TGGATGAATA CTCTTCCTAG AAAGCTTCTT GATTACAAGA CTCCAGAAGA GTTATTTGAA
ATACACTTAG ATAAAATATA TTCATTATAT TAA
|
|---|
| Protein sequence | MDYQNHNTES RKNKHLNMKE RMIVEIRLKD GFSAYKIAKE LNRPINTVLN EIRRGTTKQI
KQGKEFHVYF ADTGEAVYKK NRLKSNRKYK LLECSDFIKY VVDKVKNDHW SLDACVGEAL
HSSRFSPSQI ISTKTLYNYV DLGLLPIKNI DLPAKLHRNK KSTRVRNNKK KLGTSISDRP
NSIENREEFG HWEIDCVLGE KSNKDKVLLT LVERKTRYAI ISEMSSHSTI SVTKALDKIK
EFFGSKFSEV FKSITADNGS EFADLSEFEL KTKTKVYFTH PYSSFEKGTN ERHNGLIRRF
IPKGKRISDY SLETISFIEN WMNTLPRKLL DYKTPEELFE IHLDKIYSLY
|
|---|
| |