Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0364 |
Symbol | |
ID | 4206243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 446008 |
End bp | 447789 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564921 |
Product | uncharacterized ABC transporter, ATPase component |
Protein accession | YP_697693 |
Protein GI | 110803681 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TTAAATCAGT AGTAAAAAAG ATTTCTCCTT TTGTTGGTAA GTATAAGTGG GCTTTTTTAG GAGCTATTTT ATTTATAATT TCAGCAGCTG TTTTCACTGC CATAGCACCA AGAACAGAAG GATTAATAAT AACTCAATTA ACTAAGGATT TTGAGGGAAT TATAAGAGGA GTTTCTGGAG CTTCAGTTAA CTTTAATTAT ATTTTTAAGG TATTAATTTT ATTATTTTTA GTTTATGCAG GTGGTACAGG ATCAACTCTT ATAGCAAGTT TCTTATTAAC TAATGCAATT CAAAATACCA TGAAAAATAT TAGAAATGAA GTTGAGAAAA AAATAAATAG ACTTCCAATA AGATATTTTG ATGGTAATAG TTATGGAGAT GTATTAAGTA GAATAACTAA TGATGTAGAT ACAATCTCTA ATGCATTGCA GCAAAGTTTT GTACAGGTAA TAAATGCATT TTTATCTGTA GGATTAGCTT TAATAATGAT GTATTCCATA AATATTAAGC TAGCATTAAT TGCAACCTTA ATAATACCTT TAAGTATTTT AATTACAAAG ATAATAGTTT CTAAATCTCA GAAATTATTT AATAGTCAAC AAAAGGCCTT AGGAAATCTT AATGGAAAAG TACAAGAAAT GTACACAGGC TTTAATGAAT TAAAGTTATA TGGAAAAGAA GATGATGCTT TAAATGAATT TGTAAAGGTA AATGAAGAGT TAAGAGAAAC AGGGTTTAAA GCTCAATTTA TATCTGGTAT AATGTCACCT TTAATAAGTC TTGTTACTTA TTTAGGAATA GCTGTAGTAG GGGTAGTAGG TTCTATAATA GCTATAGGTG GTGGAATTAC CGTTGGTAAT CTTCAAGCAT TTATACGTTA TATTTGGCAA ATAAATCAGC CTTTATCTCA AGTAACTCAA TTATCATCAG CAATACAATC AGCAGTGGCT GCTGCTAATA GGGTTTTTGA ATTCTTAGAG GAAGAAGAAG AGGTTAAAGA TCTTAATAAT GCTATAAAAA TTGAGAATCC AAAGGGAGAT GTAACTTTTG AACATGTTAA ATTTGGATAT AAGGAAGATA AGCCACTTAT AAAAGATTTA AGCGTAGATG TCAAAAGTGG TCAGATGGTT GCCATTGTTG GAAAAACTGG AGCAGGTAAA ACTACTCTTA TTAATCTTTT AATGAGATTT TATGATGTTC AAGGAGGTTC AATTAAAATA GACGGTGTTG ATATTAGAGA TATGAAACGT GAAGATTTAA GAGCTATGTT TGGTATGGTT CTTCAAGACA CTTGGCTATT TAATGGAACT ATTTATGATA ATATTAGGTA TGGTAGATTT GATGCCACTA AAGAAGAAAT AATAGAGGCA GCAAAGGTTG CAAATGTTCA TCATTTTATA AAAACATTAC CAGGTGGATA TAATATGTTA TTAAATGAAG AGGCTTCAAA TGTATCTCAG GGAGAAAAGC AACTTTTAAC CATAGCTAGA GCAATTTTAA AAGATCCAGC TATATTAATA CTAGATGAGG CTACAAGTTC AGTTGATACT AGATTAGAAT TATTACTTCA AAAGGCCATG AGAAATATAA TGAAGGATAG AACTAGTTTT GTTATAGCTC ACAGGCTTTC AACTATAAGA AGTGCAGATT TAATATTAGT AATGAATGAT GGTAATATAA TTGAACAGGG AACTCATGAA GAGTTAATGA AGCAAGGTGG TTATTACGAA AGTCTTTATA ATAGTCAGTT TGCTAGTAAA GAAGTAAATT AA
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Protein sequence | MNKFKSVVKK ISPFVGKYKW AFLGAILFII SAAVFTAIAP RTEGLIITQL TKDFEGIIRG VSGASVNFNY IFKVLILLFL VYAGGTGSTL IASFLLTNAI QNTMKNIRNE VEKKINRLPI RYFDGNSYGD VLSRITNDVD TISNALQQSF VQVINAFLSV GLALIMMYSI NIKLALIATL IIPLSILITK IIVSKSQKLF NSQQKALGNL NGKVQEMYTG FNELKLYGKE DDALNEFVKV NEELRETGFK AQFISGIMSP LISLVTYLGI AVVGVVGSII AIGGGITVGN LQAFIRYIWQ INQPLSQVTQ LSSAIQSAVA AANRVFEFLE EEEEVKDLNN AIKIENPKGD VTFEHVKFGY KEDKPLIKDL SVDVKSGQMV AIVGKTGAGK TTLINLLMRF YDVQGGSIKI DGVDIRDMKR EDLRAMFGMV LQDTWLFNGT IYDNIRYGRF DATKEEIIEA AKVANVHHFI KTLPGGYNML LNEEASNVSQ GEKQLLTIAR AILKDPAILI LDEATSSVDT RLELLLQKAM RNIMKDRTSF VIAHRLSTIR SADLILVMND GNIIEQGTHE ELMKQGGYYE SLYNSQFASK EVN
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