Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0348 |
Symbol | |
ID | 4204835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 421587 |
End bp | 422954 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642564905 |
Product | RNA methyltransferase |
Protein accession | YP_697677 |
Protein GI | 110803163 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.359971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGAAA AGAATAAAGA ATATATTTTT GATATAATCT CTCAAGGATA TGAGGGTGAA GGAATAGCTA AAATTGATAA TAAATACCCA ATTTTCATTG AGGGAGCTTT AAAGGGCGAA AAGGTTAAAG TAAGAATAGT TAAGGTTAAT AAAAATTTTG CCTATGGAAA ACTTATGGAA GTATTAGAAG CTTCAGAGGA AAGAGTTAAT CCACCTTGTG CTATTTATAA AAGATGTGGT GGATGTAAAC TTCAGCACGC TTCTTACAAG GCACAATTAG ATTTTAAATG GGATAGAGTT AAGGACTGTG TTAGCAAGAT TGGAAAGTTA GATCCTAGCA TAGTTAAATA TCCTTTAGGA ATGGAAGAGC CTTGGAGATA TAGAAATAAG GTTCAGTTAC CAATAGGGTT AATTAATGGA GAGGTTAAAA TAGGATTCTT TGCTCCAAGA AGTCATGATA TTATCGACAT GGAATCTTGC TTAATTCAAG ATGAAATAGG AGATAAGGTT GTTAAACTTA CTAGAGAATG GATAGAGAAG TTTAATATAA GACCATATAA TGTAGATGGT GAGTATGATG AAAAGGGAAT AGTAAGACAC ATAATGATAA GAAGAGGTTT TACAACTAAT GAGGTTATGG TTGTCTTAGT TACAAATGGA GAAAACCTTC CTCATAAAGA AGAGTTTGTA GACTTAATGG TTAAAAATAT TCCTGGAATA AAGAGTGTTA TACAAAATAT AAACTCAAAG AAAACTAATG TAATATTAGG TTTAGAAAGT AAAACTCTAT GGGGAGAAGA TACAATATCA GATTATATAG GAGACTTTAG ATTCAACATA TCTCCATTAT CATTCTTCCA AGTAAATCCT ACTCAAACAG AGGTTTTATA TGGTAAGGCT TTAGAATATG CAAATCTTAC AGGAAATGAA GAGGTATTTG ATGCATATTG TGGAACAGGA ACAATAACAT TATTCCTATC ACAAAAGGCT AAAAAAGTTT ATGGAGTAGA AATAATTCCA CAGGCCATAG ATAATGCTTG GATAAATGCA AAGGAAAATA AAGTAGAGAA TGTGGAATTC TTCGTTGGAG AATCAGAAGT GGTGATTCCA GACTTAATAA ATAAGGGAGT AAAGGCTGAT GTGGTAGTAG TAGATCCGCC AAGAAAAGGG TGCGATAAAA AATTACTAGA TGCCATAACA AATATAGATG CTAAAAAAAT AGTATATGTA AGCTGTGATC CAAGTACCTT AGGAAGAGAC TTAAAAGTAT TAGAAGAGAA TGGCTATAAA ACTTTAGAAG TTCAACCAGT GGATATGTTC CCAAACACAG CACATATTGA AAATGTTGCT TTACTTATTA AGAAATAA
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Protein sequence | MVEKNKEYIF DIISQGYEGE GIAKIDNKYP IFIEGALKGE KVKVRIVKVN KNFAYGKLME VLEASEERVN PPCAIYKRCG GCKLQHASYK AQLDFKWDRV KDCVSKIGKL DPSIVKYPLG MEEPWRYRNK VQLPIGLING EVKIGFFAPR SHDIIDMESC LIQDEIGDKV VKLTREWIEK FNIRPYNVDG EYDEKGIVRH IMIRRGFTTN EVMVVLVTNG ENLPHKEEFV DLMVKNIPGI KSVIQNINSK KTNVILGLES KTLWGEDTIS DYIGDFRFNI SPLSFFQVNP TQTEVLYGKA LEYANLTGNE EVFDAYCGTG TITLFLSQKA KKVYGVEIIP QAIDNAWINA KENKVENVEF FVGESEVVIP DLINKGVKAD VVVVDPPRKG CDKKLLDAIT NIDAKKIVYV SCDPSTLGRD LKVLEENGYK TLEVQPVDMF PNTAHIENVA LLIKK
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