Gene CPR_0297 details

Gene Information

• Locus tag: CPR_0297
• ID: 4204985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 355337
• End bp: 356062
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642564854
• Product: ABC transporter
• Protein accession: YP_697626
• Protein GI: 110803137
• COG category: [V] Defense mechanisms
• COG ID: [COG1131] ABC-type multidrug transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTAGTT TAAAAGAGGT TAATAAGGAA TACACACAAG GAGTAAAAGC TGTAGATAAT 
TTAAATTTAG AAATTAAAGA TGGTGAGATA TTTGGTATAT TAGGACCAAA TGGAGCTGGG 
AAGACTACTA CAATAAGTAT GATTACAGGA ATAACAGAGC CTACTATGGG AGAAATAAAA 
ATAAATAATA TTGATATAAG TAAAAATCCT GTAGAAGCTA AAATGCAATT TGGATATGTT 
CCTGATAGTC CAGATATGTT TTTAAGATAT AAAGGTATAG AGTATCTTAA TTTTATGGGA 
GATGTTTATA ATGTTAGTGA ATCAGATAGA GAAGAAAGGA TTAAAGACTT AGCTAAAAGG 
TTTGAAATGA CTAATGCTTT GGGAGACAAA ATTCAAAGTT ATTCTCATGG AATGAGACAG 
AAAATAATAA TAATGGGTGT TTTAATTCAT AAGCCTAGTA TTTGGATATT AGATGAACCT 
TTAACTGGAT TAGATCCAAA ATCCTCATAC ATATTAAAAG AGATGATGAG AGAACATGCA 
AGTGAAGGGA ATACTATATT ATTTTCTACG CATGTCTTAG AAGTTGCAGA GAAGTTATGT 
GATAGGGTAG GCATAATAAA AAAGGGGAAA CTTATTTTTG TAGGTACATT AGAAGAATTA 
AAAGAAGAAT TTAAAGGTGA TGAATCACTA GAAAAAATGT TCTTGGAAAT TACTGAAAAT 
GAATAG 

 

Protein sequence

MISLKEVNKE YTQGVKAVDN LNLEIKDGEI FGILGPNGAG KTTTISMITG ITEPTMGEIK 
INNIDISKNP VEAKMQFGYV PDSPDMFLRY KGIEYLNFMG DVYNVSESDR EERIKDLAKR 
FEMTNALGDK IQSYSHGMRQ KIIIMGVLIH KPSIWILDEP LTGLDPKSSY ILKEMMREHA 
SEGNTILFST HVLEVAEKLC DRVGIIKKGK LIFVGTLEEL KEEFKGDESL EKMFLEITEN 
E