Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0271 |
Symbol | |
ID | 4206599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 329558 |
End bp | 330580 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564829 |
Product | cell envelope-related function transcriptional attenuator |
Protein accession | YP_697601 |
Protein GI | 110801829 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.968761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCAAG GCAAACATGC AAAAAAGAAT GATTCTAATA GTCAAGGTAA TACACCTAAG AAAAAAAGTA AAGTGAAAAT AATAGTATTA ACATTATTCT TCTTATTACT TATAGGTATA GGACTTGGAG CTACATATGT TTACTCAACA TTAAATAAAA TGGATATAAA GAAAATAGCT CAAGATGATA AATCTTTAGG TATTGATGAA TCAAATAAAG ACCTATTCCA AGATGGTATT TTAAATATAG CTCTTTTTGG AGTAGATAGC AGAGATCATA ATAATGTTGG ACGCTCTGAT TCAATAATAA TAGCTACAAT AGATACTAAA CATGATAAAA TAAAACTTAC ATCTCTTATG AGAGATAGTT ATGTTGAAGT TGATGGACAT GGTAAAACTA AATTAACTCA TGCTTATGCT TATGGTGGTC CTACTTTAGC ATTAAAAACA ATAAATGAAA ACTTTGGATT AGATATAAAA GACTATGTAA CTGTTAACTT TGATAACTTA GCTGAAATAA TAGATGATTT AGGTGGAGTA CCAATAAATA TAAAACCTTA TGAAGTTAAG GAAGTTAATA ATTACGCTAA AAATGTTGCA GAAATTGCTG GAAGAGAATA TACGCCAGTT AGTGAAGGTG AGCAAGTATT AAATGGTGCC CAAGCTGTAG GTTACTCTAG AATTCGTTAT GTTGGTGATG GAGATTATGA AAGAACTGAA AGACAAAGAA ATGTTCTTGA TGCAATCATA AAGAAACTTT CAACATTAAA ACCTTCTGAA TATCCTGAAA CAATAAAAAA ATTTTTACCT TATGTTGAAA CAAACTTAAC TCCATCTAAA ATACTTAGTA TTGCTAAATC AGTTGCTTCA ACTGGTATCC CACCTGTTGA AAATATGCGT TTCCCTCTAA ATGGATATTG CAAAGGGGAA ATGATTGATG GTGTTTGGTA TTTAACATTT GATGAAGCTA AAACAAAGGA ACAAATACAA AACTATATAT ATAAGGATGT TAATCCAAAA TAA
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Protein sequence | MSQGKHAKKN DSNSQGNTPK KKSKVKIIVL TLFFLLLIGI GLGATYVYST LNKMDIKKIA QDDKSLGIDE SNKDLFQDGI LNIALFGVDS RDHNNVGRSD SIIIATIDTK HDKIKLTSLM RDSYVEVDGH GKTKLTHAYA YGGPTLALKT INENFGLDIK DYVTVNFDNL AEIIDDLGGV PINIKPYEVK EVNNYAKNVA EIAGREYTPV SEGEQVLNGA QAVGYSRIRY VGDGDYERTE RQRNVLDAII KKLSTLKPSE YPETIKKFLP YVETNLTPSK ILSIAKSVAS TGIPPVENMR FPLNGYCKGE MIDGVWYLTF DEAKTKEQIQ NYIYKDVNPK
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