| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0238 |
|---|
| Symbol | |
|---|
| ID | 4204920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 292045 |
|---|
| End bp | 293772 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642564795 |
|---|
| Product | dnaK family protein |
|---|
| Protein accession | YP_697572 |
|---|
| Protein GI | 110802880 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.878692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGAA TAATAGGAAT TGATTTAGGG ACAACAACTT CAGAAATAGC TTATGTAAAA
GATGGTAAGC CATGTATAAT AAGAAATATT GAAGAAGGAG ATGAACATGC TATTCCATCA
GTGGTTTCTA TAGAAGGAGA TGAAATAAAG GTTGGAAAGA AAGCTAAAAA TCAAATTTTA
CTAAAGCCTG AATTAACAGT TGCTGAGGTA AAGAGAGTTA TGGGAACAGA AAATATTATA
CAAATTCAAG GGAAAGAATA CAGACCAGAA GAAATTTCAG CGCTAATTTT AAAAAAATTA
AAAGAAGTAG CTGAATATTT TTTAGGAGAA GAAGTAGAAG AGGCCGTAAT AACTGTTCCT
GCTAATTTTA ATGATATACA AAGAAAAGCT ACAAAAAATG CTGGGGAAAT AGCTGGTTTT
AAAGTAGAAA GAATAATAAA TGAACCTACT GCGGCTGCCA TGGCTTATGG AGTAGATAAT
CTAGATAAAA ATGGTAATAT TCTAGTTTAT GACTTTGGAG GGGGAACCTT TGACGTAACT
ATACTAGAAA TGTTTAATGG AGTTTTAGAT GTAAAGGTAA GTAGAGGAAA TAATTATTTA
GGTGGAAAAG ATATTGATAA TAAATTAATA GACCATGTGG TAAATGAATT TAATAAATCA
ACAGGTGTAA AATTAGATAC CTCAGATAGT AGAATTTTGG CTAGACTTAA GGAAGGGGTA
GAGGAAGCTA AAAAAACATT ATCCACATCT AAGATGGCTG AAATAGTACT TCCTTATATT
AGTGCTGACA AAGATAATAA TCCAATAAAC TTAGAAATGG TATTAACTAG GGAAGAATTT
GAGTTTAATG TTAAAGAAAT AATAGATTCT ACTGAGGATA TAGTAAATGA GGCTTTAGAG
GATGCAAATA TTACTAATAA TGAGATAGAT ACAGTATTAT TAGTTGGTGG TTCTAGTAGA
ATACCTTATG TAAGAAATAT GCTTGAAAAA AGATTTAAAG GAAAAATAGC AAGGGGAGTA
AATCCAGATG AGGCTGTGGC TTTAGGGGCT TCAGTACAAG CTGCTATTAA AAATGATATT
CCAGTTGGAG ATTCAGGTAC AATAATAGTT ACTGATACAT GCAACTATAC TTTAGGAGTG
GCATTAAAGG GAGGAATTTT TGATCCTATA ATTGATAGAG ATTCAAAATT ACCTGCAGAT
GTAACAAAAA GATATTGTAC AGTTATGGAT AATCAAACAG AGGTGTTGGT AAGTGTTTAT
GAAGGTGAAA GTAGGTATGT TAGTGATAAT ACCTTAATAG ATGAATTTAT ATTATCAGGA
ATACCAAAGG CTGATACTGG TAAAGAAAAA ATAGATATTA CCTTTACTTA TGATTTAAAT
GGAATTTTAA ATGTTTCAGC AGAAATTCTT TCTACTGGAG ATGAAATTTC TAAAATAATG
TCTACTAAAG GCCTTTCAAA AGAAGAAATT AAGGATCTTA AAGAAGTAGT TTCAAGTAAT
GAAAATAATA ATGAACTTGT ACCTTGGAAA TCAGCCAATT TATTTAAATT AGTAGAGCCT
AATTTTAGGT TAGCAGAAAG AAAAATTCCT ATGCTACCAA GTGCTGATAG AGAAAAGCTT
CAAGAAATTA TGAGTGACAT GAAGGATGCC ATAGTAGATA ATGATAAAAT GGCACTTATG
AAATTAGATG AAGAACTTAC AGATTTTTTA TTTGATTTCG TAAATTAA
|
|---|
| Protein sequence | MGRIIGIDLG TTTSEIAYVK DGKPCIIRNI EEGDEHAIPS VVSIEGDEIK VGKKAKNQIL
LKPELTVAEV KRVMGTENII QIQGKEYRPE EISALILKKL KEVAEYFLGE EVEEAVITVP
ANFNDIQRKA TKNAGEIAGF KVERIINEPT AAAMAYGVDN LDKNGNILVY DFGGGTFDVT
ILEMFNGVLD VKVSRGNNYL GGKDIDNKLI DHVVNEFNKS TGVKLDTSDS RILARLKEGV
EEAKKTLSTS KMAEIVLPYI SADKDNNPIN LEMVLTREEF EFNVKEIIDS TEDIVNEALE
DANITNNEID TVLLVGGSSR IPYVRNMLEK RFKGKIARGV NPDEAVALGA SVQAAIKNDI
PVGDSGTIIV TDTCNYTLGV ALKGGIFDPI IDRDSKLPAD VTKRYCTVMD NQTEVLVSVY
EGESRYVSDN TLIDEFILSG IPKADTGKEK IDITFTYDLN GILNVSAEIL STGDEISKIM
STKGLSKEEI KDLKEVVSSN ENNNELVPWK SANLFKLVEP NFRLAERKIP MLPSADREKL
QEIMSDMKDA IVDNDKMALM KLDEELTDFL FDFVN
|
|---|
| |