Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0213 |
Symbol | |
ID | 4205183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 267277 |
End bp | 268263 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642564770 |
Product | putative ferrichrome ABC transporter permease |
Protein accession | YP_697548 |
Protein GI | 110802055 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAAA ATAATAAGTT AAAAAGCTTA TATATAGGTT TATCAATATT AATAGTTTTA ATTTTAATGA TAATTTCTTT AAAGCTAGGA AGTATTGATA TAAGTTTTGG TGAACTAATA AAAGGTCTTT TAAGTGGAAG TAATGAAGGA AATATAGGAA TAATAAAAGA TTTAAGAATG CCGAGAGTTA TTATAGCTGC TTTAGTTGGA GGAAATCTTG CCTTGGCAGG GGTATTACTT CAGGCAGTAA TAAGAAATCC CTTGGCTGAT CCTCAAGTAA CAGGAATATC TTCTGGAGCA TGCTTAGTAT CATTAATATT TATAATATTT ATGCCAGCTT CAGGATCGAT AAGACCAATA GTAGGTTTCT TTGGAGGGCT TGTTTCTTGT ATAGTTGTGT ATTTAATGGC TTATAAAAAA GAGTTAGATA CTATGAGAAT AGTCCTTGCA GGGGCTGCTA TAAATGCTCT TTTAGGAGGG CTATCACAAA TATTAACTAT AGGTAGTGGC ATAGGTGCAG GGAATATACA ATCTTGGATA AGTGGAAGTT TAGCTGCCAC CTCATGGGAT GAAGTTAAAA TTTTATTTTT ATATTCAATA ATAGGAATGG GTTTTGCATT AATTTTAGCT AAGTCATGTA ATGTTATAGT TTTAGGAAAT AAAAATGCAA AAAGTTTAGG TTTTAATTCA GATTTACAAA TGATTCTCAT AACAGTGGTA GCTGTATTTT TAGGGAGTGT ATCAACGGCT ATTGTAGGTA TTATTTCCTT TGTTGGATTA GTTGTACCAC ATATTTGTAG AATATTAATT GGCTCTGATC ATAGATATTT GATTCCTTTT TCAATATTTG TTGGAGGAGC ATTAGTCTTA CTTGCAGATA CAATAGGAAG AATGCTAGTA AAGCCATATG AAATACCAGC AGGAATAATT ATGGCAGTTA TTGGAGCACC ATTCTTCTTA TATCTACTAA GAAGGAGTGA TATGTAG
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Protein sequence | MVKNNKLKSL YIGLSILIVL ILMIISLKLG SIDISFGELI KGLLSGSNEG NIGIIKDLRM PRVIIAALVG GNLALAGVLL QAVIRNPLAD PQVTGISSGA CLVSLIFIIF MPASGSIRPI VGFFGGLVSC IVVYLMAYKK ELDTMRIVLA GAAINALLGG LSQILTIGSG IGAGNIQSWI SGSLAATSWD EVKILFLYSI IGMGFALILA KSCNVIVLGN KNAKSLGFNS DLQMILITVV AVFLGSVSTA IVGIISFVGL VVPHICRILI GSDHRYLIPF SIFVGGALVL LADTIGRMLV KPYEIPAGII MAVIGAPFFL YLLRRSDM
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