| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0195 |
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| Symbol | |
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| ID | 4206435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 242461 |
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| End bp | 244836 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 642564752 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_697530 |
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| Protein GI | 110802656 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00184929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATT CAATATTTTT TCATATTTTT AATGATGATA AAAATAAATT AGAAACTAAA
AGAATAATAA AACTATCTAT TTTTATAGTT TTCTCTATAT TTTTTATATT AACACTAGAT
CTATCTTATA AAGTTCTTAT TAGAAAAAAT ATAGAGTTTA TTCCTAATAA TTCTATTCCA
AATTTCCCAT TAAGTCTATC ATTAATATTA GGAACAATGG CATACATAAG TTCATTAATA
TATTATTCAA GCACTAAAAA AGATGATTTT TTTATAATCT CTTTAATATA TATGAATTTA
TCTGTAGAAC TTTTAATTAC TAAAGGACAT AATCTAATAA TATTCGATAA GTTTATTTTT
ATACACGCAA TATTTAGGAT AATTTTGCTT TTTTATGTTG CCTTTAATAA GAAAGGAATA
TCACCTCTTA TTACTAAACA TAAAACAATT TCATCAGTAG CAGTATTTTT ATTTTCAGTT
ATAACACCTA TGATTAACTA TAAAATTTTT TCTAATAAGT TATTTACTAA AGATATTTAT
TTTTATGCTA CTTTAATGAC TATTATTATT ATCCTCTATA TAATTGCTTG CATATTTTTA
TCAAAGAAAT CTTTAGATGA TTGCGAGTTA ATATATTCAT TTATAATTGC TAGTATTCTT
TTAATAGCAT TAAGAGGATT ATACTGGATT TGTGAAGTAC TTCTTCCAAA TATAACACTT
TTAAAAACCA ATAATGTTGT TCTTCTACTT ACTATTCTGT CATTTTTATT GGCTATAAGT
GGAGTTTTTA ATGAAATTAC GACTAAAAAC AAAAAAAGTT CTTTACTACA AAATGAACTC
CAAGTTTTCT ATCATTTAGT TGAATTTAAT ACCAGTAGTT CTATAATTCT ATATGATAAT
AAAAAGAAGG TTATATATAC AAATAAAACA ATAAGAGAAC GCTATTGCAA ATCAACTGAA
TTAAAAGATC AACTTAAAGA GGTAGAAAAA TTATTTGTAG ATTCGATTTT TATAGATGAC
TCTGAAAAAA ATGCTACTAA ATCACTTTTT AATAAGGGCA ATTGGGAAGG TAAGATTATT
TTAAAAAACG ACAAAATAGT AAGTGCCTAC ATACAGATAT TAAATGTTGA AAATAAAAAT
TATTTTGCTG TGAATTTAAA AGATATAACT GAAGAATATA CCCTAACAAA AAATATTAAA
AGAAATGAAC AATTATTAAG TTGTATAAAT AATAACGTAC AGGATTTAAT AATAAGTGTT
GATAATAATG GTTTAATTAC ATATGTTAAT GATTCTGTAT TAGAAACATT AAATTATACC
TATGAAGAGA TCATAGGTAT GCCTATAATA AACCTTTTAG GTAAAAATGA TGAGATATTA
AATCAATTAA AACTAGAAGA TGAGGAAGAT AGTATTAAAT GTAAACTTGT TGGTAAACAC
TCTTTTGTTT ATGTAGAATC TATAATTAGA ACTTTAAGCG ATAATAATGA AATTCCTTAT
GGAAAAGTTA TAGTTGCAAA AAACTTAACA TCTAAAAAAC GTCTTGAAAA TTTAGCTATC
AAATTTAAGG AAGCTAAGGC TTATGAACAA ATAAGAAATG AATTTTTCGC CAATATATCA
CATGAACTTA GAACACCACT TAATATTATC TACTCTACAA TACAATTATT AAATTCTAAG
CATGAAACTA ACTATGTGAA TTTTAATGAT TTCTATGGCA AATATAAACA AGGTCTAAAA
ATAAATTGTT ATAGAATGCT TAGACTTATA AATAACCTTA TTGATGTTAG TAAAATCGAA
GTTGGATTTT TAAAAGCTGA TTTTACTAAT AGAGATATAG TATTTCTTGT AGAAAATATA
GTATCTTTGG TTATTCCTCA TTCTGAAAAT AAGGATATTA ATATAATCTT TGATACTAAT
GTTGAAGAAA ACATAATAAA ATGTGATCCT GTAAAAATTG AAAGATTAAT TCTTAACTTA
CTTTCAAATG CAATAAAATT CACCCAAAAT CATGGTAAAA TATTTGTGGA TTTAAACATC
TCAAAGGATT GGGTTAAAAT AAGCATAAAA GATAATGGAA TCGGTATTCC TAAAGAAATG
CAGGCATCAA TTTTTGATAG ATTTGTACAA GCTGATAAAT CTTTAAAAAG AAGAAATGAA
GGTAGTGGAA TAGGTCTTAG CATTGTAAAG TCTATTGCTG AACTACATGA TGGTAAAATT
GAACTTATAA GTGATGGAAT AAAAGGTTCA GAATTTATAG TATGGCTACC AAATGTAAAA
TTAAATTACA CAGAAGAAAG CAATAATTTA GTTGATTATA TAACAGATGA TAAAAATATA
GAGTTAGAGC TTTCTGATAT TTATGAAGTA CATTAA
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| Protein sequence | MDNSIFFHIF NDDKNKLETK RIIKLSIFIV FSIFFILTLD LSYKVLIRKN IEFIPNNSIP
NFPLSLSLIL GTMAYISSLI YYSSTKKDDF FIISLIYMNL SVELLITKGH NLIIFDKFIF
IHAIFRIILL FYVAFNKKGI SPLITKHKTI SSVAVFLFSV ITPMINYKIF SNKLFTKDIY
FYATLMTIII ILYIIACIFL SKKSLDDCEL IYSFIIASIL LIALRGLYWI CEVLLPNITL
LKTNNVVLLL TILSFLLAIS GVFNEITTKN KKSSLLQNEL QVFYHLVEFN TSSSIILYDN
KKKVIYTNKT IRERYCKSTE LKDQLKEVEK LFVDSIFIDD SEKNATKSLF NKGNWEGKII
LKNDKIVSAY IQILNVENKN YFAVNLKDIT EEYTLTKNIK RNEQLLSCIN NNVQDLIISV
DNNGLITYVN DSVLETLNYT YEEIIGMPII NLLGKNDEIL NQLKLEDEED SIKCKLVGKH
SFVYVESIIR TLSDNNEIPY GKVIVAKNLT SKKRLENLAI KFKEAKAYEQ IRNEFFANIS
HELRTPLNII YSTIQLLNSK HETNYVNFND FYGKYKQGLK INCYRMLRLI NNLIDVSKIE
VGFLKADFTN RDIVFLVENI VSLVIPHSEN KDINIIFDTN VEENIIKCDP VKIERLILNL
LSNAIKFTQN HGKIFVDLNI SKDWVKISIK DNGIGIPKEM QASIFDRFVQ ADKSLKRRNE
GSGIGLSIVK SIAELHDGKI ELISDGIKGS EFIVWLPNVK LNYTEESNNL VDYITDDKNI
ELELSDIYEV H
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