Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0175 |
Symbol | nanA |
ID | 4204370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 215167 |
End bp | 216033 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564730 |
Product | N-acetylneuraminate lyase |
Protein accession | YP_697512 |
Protein GI | 110801754 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00683] N-acetylneuraminate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGTA TTTATTCAGC ATTATTAGTT TCATTTGACA AGGATGGAAA CATCAATGAG AAAGGTTTAA GAGAAATAAT TAGACACAAT ATTGATGTAT GTAAAATAGA CGGGCTTTAT GTAGGAGGAA GTACTGGAGA AAACTTCATG CTTTCAACTG ATGAAAAGAA AAGAATATTT GAAATTGCTA TGGACGAAGC AAAAGGACAA GTTAAATTAA TAGCTCAAGT AGGATCAGTT AATTTAAAAG AAGCTGTAGA GTTAGCTAAA TTTACTACAG ATTTAGGATA TGATGCAATA TCAGCAGTTA CACCATTCTA CTATAAATTC GATTTTAATG AAATAAAACA TTACTATGAA ACAATAATAA ATTCTGTTGA CAATAAACTT ATAATTTACT CAATTCCTTT CTTAACAGGA GTAAATATGT CAATAGAACA ATTTGCTGAG CTTTTTGAAA ACGATAAGAT TATTGGTGTT AAATTCACAG CAGCAGACTT CTACTTATTA GAACGTATGA GAAAAGCATT CCCAGATAAA TTAATATTTG CTGGATTTGA TGAAATGATG TTACCAGCTA CAGTACTTGG TGTTGATGGA GCTATAGGAT CAACATTTAA CGTAAATGGT ATTAGAGCAA GACAAATCTT TGAAGCTGCT CAAAAAGGTG ACATTGAAAC TGCTTTAGAA GTTCAACATG TAACTAATGA TTTAATAACT GATATCTTAA ATAATGGTCT TTACCAAACA ATAAAATTAA TTCTTCAAGA GCAAGGTGTT GATGCTGGAT ATTGTAGACA ACCTATGAAA GAAGCTACTG AAGAAATGAT TGAAAAAGCT AAGGAAATTA ATAAAAAATA TTTCTAA
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Protein sequence | MKGIYSALLV SFDKDGNINE KGLREIIRHN IDVCKIDGLY VGGSTGENFM LSTDEKKRIF EIAMDEAKGQ VKLIAQVGSV NLKEAVELAK FTTDLGYDAI SAVTPFYYKF DFNEIKHYYE TIINSVDNKL IIYSIPFLTG VNMSIEQFAE LFENDKIIGV KFTAADFYLL ERMRKAFPDK LIFAGFDEMM LPATVLGVDG AIGSTFNVNG IRARQIFEAA QKGDIETALE VQHVTNDLIT DILNNGLYQT IKLILQEQGV DAGYCRQPMK EATEEMIEKA KEINKKYF
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