Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0170 |
Symbol | |
ID | 4205679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 210570 |
End bp | 211361 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564725 |
Product | hypothetical protein |
Protein accession | YP_697507 |
Protein GI | 110803322 |
COG category | [R] General function prediction only |
COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAT ACGCTAGAAT ATATGTGCAA TTTTTGAAGC AATACCTAAA GACATTGCTT GAATACAAAG AGGATTTTAT ATATGGTATT TTAGGATTTT TTCTAGTTCA AGCTACCTCT ATAATTTTTA TTTCTCTTAT ATTTAATAAT GTACCCACTC TTTCTGGATG GAGTTTTTAC GAAATAATCT TTATATATGG ATTTTCTCAA ATTCCAAGGG GAATTGATCA CATATTTACT GATTATTTGT GGATTTTTTC TGGTAGAAGC ATAGTTCGTG GAGAGTTTGA TAGATATTTA TTAAGGCCTT TAAATCCACT ATTTCAAGTA ATAGCTGAAA GATTTCAACC TGATGGTTTT GGAGAACTTG TAGTTGGATT TATTCTTGTG GTTTATTCTG CAATAAAGCT TAGTGTAAAT ATTACTCTCC TTTGGATTAT AGGCTTTATA ATTGCTGTTA TTGGAGGAAC CTTAATCTAT ACAGGAGTTA AGCTTGCTAC AGCCTCCATA GCCTTTTGGA CTAAGACAAG CTTTAGACAT GTTCAAATGG CCTATGGATT AAGTGATTTT TCTAAGTATC CTATAAGTAT TTACCCTGGT GCTATAAAAT TCTTATTAAC CTTTATAATT CCATTTGCTT TTACAGGATA CTACCCTGGA ACATATCTAC TTGGTAAGGA AAGCTTCTTC ATGGGAGTTA TACTTACCTT AATAGTAGGT ATTTTATCAA TAGTTGTATC ATACAGAATA TGGTTTAAAG GGGTTTCATC TTACGAAAGT TCTGGAAACT AA
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Protein sequence | MKRYARIYVQ FLKQYLKTLL EYKEDFIYGI LGFFLVQATS IIFISLIFNN VPTLSGWSFY EIIFIYGFSQ IPRGIDHIFT DYLWIFSGRS IVRGEFDRYL LRPLNPLFQV IAERFQPDGF GELVVGFILV VYSAIKLSVN ITLLWIIGFI IAVIGGTLIY TGVKLATASI AFWTKTSFRH VQMAYGLSDF SKYPISIYPG AIKFLLTFII PFAFTGYYPG TYLLGKESFF MGVILTLIVG ILSIVVSYRI WFKGVSSYES SGN
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