Gene CPR_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0157 
SymbolarcA 
ID4206185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp193204 
End bp194445 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content32% 
IMG OID642564712 
Productarginine deiminase 
Protein accessionYP_697494 
Protein GI110803740 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATG ACAGAGCATT AAATGTTACT TCTGAAATAG GAAGATTAAA AACAGTTCTA 
TTACATAGAC CTGGAGAAGA AATTGAAAAT TTAACACCAG ATCTATTAGA TAGACTACTA
TTTGATGACA TTCCATACTT AAAAGTTGCA AGAGAAGAAC ATGACGCTTT TGCACAAACT
TTAAGAGAAG CAGGAGTAGA AGTGCTTTAT TTAGAAGTTC TTGCTGCTGA GGCGATAGAA
ACTAGTGATG AGGTAAAACA ACAATTTATA AGTGAATTTA TTGATGAGGC TGGAGTTGAA
AGCGAGAGAT TAAAAGAAGC ATTAATAGAA TACTTCAACT CATTTAGTGA TAATAAATCA
ATGGTGGATA AGATGATGGC TGGGGTAAGA AAAGAAGAAC TTAAGGATTA CCACAGAGAA
TCATTATATG ACCAAGTAAA TAATGTATAT CCATTTGTAT GTGATCCAAT GCCAAATCTT
TATTTTACAA GAGATCCATT TGCAACAATT GGACATGGTA TTACATTAAA CCACATGAGA
ACAGATACAA GAAATAGAGA AACAATATTT GCTAAATATA TATTTAGACA TCATCCAAGA
TTTGAAGGAA AGGATGTTCC ATTCTGGTTC AATAGAGATG AAAAGACTTC ACTTGAAGGT
GGAGATGAAT TAATACTTTC AAAAGAAGTT TTAGCAGTTG GTATATCACA AAGAACTGAT
TCAGCATCAG TTGAAAAATT AGCTAGAAAG TTACTTTACT ATCCAGATAC AAGCTTTAAA
ACTGTATTAG CATTTAAAAT ACCAGTATCA AGAGCATTTA TGCATTTAGA TACAGTATTT
ACTCAAGTTG ATTATGATAA ATTTACAGTT CATCCTGGCA TAGTAGGACC TTTAGAAGTT
TATGCTATAA CTAAAGATCC AGAAAAAGAT GTACAACTAA TTGCAGTTGA AGAATGTGAT
ACTTTAGAAA ATATATTAAA GAAATACTTA AAGAGAGATA TTGAGTTAAT AAAATGTGGT
GGAGGAGATG AAATAATAGC TGCTAGAGAA CAATGGAATG ATGGTTCAAA TACACTTGCT
ATTGCTCCAG GAGAGGTTGT AGTTTATTCA AGAAACTATG TAACTAATGA AATATTAGAG
AAGAAAGGAA TTAAGTTACA TGTTATTCCT TCATCTGAAT TATCAAGAGG TAGAGGGGGC
CCTAGATGTA TGTCAATGCC TCTAATAAGA GAAGATTTAT AA
 
Protein sequence
MRDDRALNVT SEIGRLKTVL LHRPGEEIEN LTPDLLDRLL FDDIPYLKVA REEHDAFAQT 
LREAGVEVLY LEVLAAEAIE TSDEVKQQFI SEFIDEAGVE SERLKEALIE YFNSFSDNKS
MVDKMMAGVR KEELKDYHRE SLYDQVNNVY PFVCDPMPNL YFTRDPFATI GHGITLNHMR
TDTRNRETIF AKYIFRHHPR FEGKDVPFWF NRDEKTSLEG GDELILSKEV LAVGISQRTD
SASVEKLARK LLYYPDTSFK TVLAFKIPVS RAFMHLDTVF TQVDYDKFTV HPGIVGPLEV
YAITKDPEKD VQLIAVEECD TLENILKKYL KRDIELIKCG GGDEIIAARE QWNDGSNTLA
IAPGEVVVYS RNYVTNEILE KKGIKLHVIP SSELSRGRGG PRCMSMPLIR EDL