Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0149 |
Symbol | |
ID | 4205629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 183066 |
End bp | 183743 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564704 |
Product | hypothetical protein |
Protein accession | YP_697486 |
Protein GI | 110803407 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA AGAGTTTAAT AATTTTAAGT ATAATAGTTT TAATATTTGT ATGTATAACT CTTTATTTAA CTAGAGAACA TATAATGGTT TTTTATAAAT TAATTACTAA TGGTGAAGTT ATAAAGAGTT ATCTTGAAAG GTTTGGCCCT TGGGCAGCTA TAATATTTTT TATCTTTCAA ATATTACAGG TAGTTATATT CTTTATTCCA GGAGAGGTTA TACAAGCTGC TGGGGGGTAT ATATTTGGTG CCTTAGGAGG AACTTTACTT TCATTTTTCG GCATAGCAGT TGGATCTGCA ATATTATTTT ACATATGTCA AAAGTTTGGA AAGAAGCTAG TACAAAGGTT TGTGCCTAAG GATATGTATG ATAAATTAGA AAAGATTTTA AATAGCCCTA AGTTTAAACT TATATTGGTA ATACTATTCT TTTTACCAGG GGCACCTAAA GATTCACTTA TTATGGTTTG TGCCTTAAGT AACATAACCA TAGGACACTT TATAATATTC TCTATGATAG GAAGAATACC AGCCTTAGTT GCATCTTCTT TTATGGGAGC AAATTTAGCA GAGGGTAATA TTGTAGGAGT AATAATTATT GGTGTAATAG CCTTAATAGC TTGTACTTTA GGGGTTATAT TCAGAAAAGA TATATTTAAG TACATGGAAA AACTTTAA
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Protein sequence | MKKKSLIILS IIVLIFVCIT LYLTREHIMV FYKLITNGEV IKSYLERFGP WAAIIFFIFQ ILQVVIFFIP GEVIQAAGGY IFGALGGTLL SFFGIAVGSA ILFYICQKFG KKLVQRFVPK DMYDKLEKIL NSPKFKLILV ILFFLPGAPK DSLIMVCALS NITIGHFIIF SMIGRIPALV ASSFMGANLA EGNIVGVIII GVIALIACTL GVIFRKDIFK YMEKL
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