Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0144 |
Symbol | |
ID | 4204839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 175735 |
End bp | 177909 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642564699 |
Product | peptidoglycan bound protein |
Protein accession | YP_697481 |
Protein GI | 110802896 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4932] Predicted outer membrane protein |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA GTAAAAATTT CAATATATTT ACCTTATGGT CAGTTGTTAT TTCTATGATA TTAATTATGA TTTCTCCTGG AAGCATTGTT TTAGGAGAAG AAACAAAATC AGTTCAAAAT GATGGGGCTG TTGAAATTAC AAGCACTACC TTTGAAAGTA ATACTGTTGC TAAAGGCATA AGTAATAATT TAAGAATTGA CTATAAGATT TTGAATAAAG ATAAGCTTAA AGATGGTGAT AAAATTGTTA TAAGTTTGCC AGATATATTT AAAGACATAG AGCCTAAATG TCATGATCAG CATTTTAAGG ATTTTGATGT TAAGGATGGA GTGGTGACTT TAACCTTTAA TGAAAATGTA GAAAAAGCTG TAACAGGATA TATGATTATA AGATTTGTGG GAAATAGCAA TATTAGAAAG GGAGTAAGTT ACCCAGTTAG TATTGATTTA AATGGAAAGC CAAGCACTGT TTATATAACA GGAGAAGAAT ATTCCAATTC TAGTTCTGGT GGACAATACC CTCTTATGTA TAAGACTGCT GATTTACCAA CAGCTGCTAC AGATAAGGAA CAAGGAAGAG AGTATTATGG AGAGATAGTA GATAGGAATA AACCTATAAA ATATTTTGTG GAAATAAATT TAGGTGATGG AGTAAATCCA AATACAAGAA GTTATTTAAG CAATGCTGAT TTTTTTGATA ATATTCCAAA GGGCATGGCT TTAGATATAA ATAGTATATG CATAAAAAGA ATGGGTTACT ATGATGAAAG AAGTAGTGAT GTTACCAAGG ATTTTTGGGA GAGTAATAGA ATAAAGGCTG ATACCAAACA TTTAGAAATA AATTTTGGTG ACATAAGATA TGAGAGATAT ACAATTATCT ATGAAACTCG TATTACTTCT ACTGAAAGTG GATATTTAAA TGATGCTAAA TTATATTATG ATGATGATAA AGAGTTGCCT TCAAAGCATT ATTCAAAGTT ATCAAAGGAT GCAGGAGCAT TAAATGTTTA TAAATATGTT GATAAGACAA AGGTAACAAA TAATCCTAAT GACCAAAAAA TTAAATATGA TATTAAGTTT GATTCCTATG GATACTTTTT TAAGGATACT TTAAATATTA TTGATAAATT AGATCCTAGA CTAAGTGATA TTAAGATTAC GGCTACAGAT CAATTTATAA CTGATTTTTA TGAAAACACA AAGGAATTAG TTATTAAAAA TAGTAATGGA GATATAGATG CTAAAAAGCC AGCATATATC ACCATAGAAG CAAGTATGAA AAATGTAGGG CCAGGGGAAG TAGTAAAAAA TATTGCATAT GTAAATGGAA ATCCAACTAA TGAGGTTTCA ACTAGAAAGA ATCCTATAGT GGAAATAATC AAGGTTTCTA AAGACGATGT AGAATCAAAT TTACTTGAAG GAGCAGTTTT TAAACTAACA ACTAAAGATG GTAAAACTGT TAAGGATGTG TACAACCAAT TGGTTAAAAC GTTTACAACA AATTCTGAAG GGCCAATAAG GTTTGAATTA CCTAATGGAG ATTATAAATT AGAGGAAATA AAGGCTCCTA ATGGATATAA ACTTGATCAA ACGCCTATTG AATTTACTGT AAATGATGAA AGTAAGATAG TTAAGGTTGT GGCTAAGGAT GATCCTTTAT CAACTACTTG TAACTTAGTT ATAAACAAAA TAAATGAAAA AGAAATTCCT ATTTTAGGAG CTAAATTTAA ATTATTTGAA GAAAGTAATC CAAAAAAAGT TTTAAAATTT AGTTCTCAGA AAAATAATTA CGAATTAAAT CAAAATGGAG TTGGGAAATT AACACCTTCA GGGAAAAATG CATCTTTTAA AATTAATAAT TTACCTTATG GCAATTACAT ATTAAAAGAG GTACAGGCTC CTAAGGGATA TAAATTAAGT GATGATATTT ATATAACTCT AGGTTTTGAA GAAAGTTTTT ATAGAGTTGG AAAAGAAGGA GAAAAAATAA TTTTAAATAA AAATACAGAA ACAAATACAT ATGATATTTC AGTTAAAAAT GTTCCAAGAA TAATACTACC TGAAACAGGA GGCTGTGGAA CTTCTAAATT TTCATTAATT GGAATTACAC TTTTAGCAGG TGTATTAAGC ATAGTTAGTA CTACAAAATT TGTTTTAAAA GAAAGGGAGA ATTAA
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Protein sequence | MKNSKNFNIF TLWSVVISMI LIMISPGSIV LGEETKSVQN DGAVEITSTT FESNTVAKGI SNNLRIDYKI LNKDKLKDGD KIVISLPDIF KDIEPKCHDQ HFKDFDVKDG VVTLTFNENV EKAVTGYMII RFVGNSNIRK GVSYPVSIDL NGKPSTVYIT GEEYSNSSSG GQYPLMYKTA DLPTAATDKE QGREYYGEIV DRNKPIKYFV EINLGDGVNP NTRSYLSNAD FFDNIPKGMA LDINSICIKR MGYYDERSSD VTKDFWESNR IKADTKHLEI NFGDIRYERY TIIYETRITS TESGYLNDAK LYYDDDKELP SKHYSKLSKD AGALNVYKYV DKTKVTNNPN DQKIKYDIKF DSYGYFFKDT LNIIDKLDPR LSDIKITATD QFITDFYENT KELVIKNSNG DIDAKKPAYI TIEASMKNVG PGEVVKNIAY VNGNPTNEVS TRKNPIVEII KVSKDDVESN LLEGAVFKLT TKDGKTVKDV YNQLVKTFTT NSEGPIRFEL PNGDYKLEEI KAPNGYKLDQ TPIEFTVNDE SKIVKVVAKD DPLSTTCNLV INKINEKEIP ILGAKFKLFE ESNPKKVLKF SSQKNNYELN QNGVGKLTPS GKNASFKINN LPYGNYILKE VQAPKGYKLS DDIYITLGFE ESFYRVGKEG EKIILNKNTE TNTYDISVKN VPRIILPETG GCGTSKFSLI GITLLAGVLS IVSTTKFVLK EREN
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