Gene CPR_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0144 
Symbol 
ID4204839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp175735 
End bp177909 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content28% 
IMG OID642564699 
Productpeptidoglycan bound protein 
Protein accessionYP_697481 
Protein GI110802896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4932] Predicted outer membrane protein 
TIGRFAM ID[TIGR01167] LPXTG-motif cell wall anchor domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA GTAAAAATTT CAATATATTT ACCTTATGGT CAGTTGTTAT TTCTATGATA 
TTAATTATGA TTTCTCCTGG AAGCATTGTT TTAGGAGAAG AAACAAAATC AGTTCAAAAT
GATGGGGCTG TTGAAATTAC AAGCACTACC TTTGAAAGTA ATACTGTTGC TAAAGGCATA
AGTAATAATT TAAGAATTGA CTATAAGATT TTGAATAAAG ATAAGCTTAA AGATGGTGAT
AAAATTGTTA TAAGTTTGCC AGATATATTT AAAGACATAG AGCCTAAATG TCATGATCAG
CATTTTAAGG ATTTTGATGT TAAGGATGGA GTGGTGACTT TAACCTTTAA TGAAAATGTA
GAAAAAGCTG TAACAGGATA TATGATTATA AGATTTGTGG GAAATAGCAA TATTAGAAAG
GGAGTAAGTT ACCCAGTTAG TATTGATTTA AATGGAAAGC CAAGCACTGT TTATATAACA
GGAGAAGAAT ATTCCAATTC TAGTTCTGGT GGACAATACC CTCTTATGTA TAAGACTGCT
GATTTACCAA CAGCTGCTAC AGATAAGGAA CAAGGAAGAG AGTATTATGG AGAGATAGTA
GATAGGAATA AACCTATAAA ATATTTTGTG GAAATAAATT TAGGTGATGG AGTAAATCCA
AATACAAGAA GTTATTTAAG CAATGCTGAT TTTTTTGATA ATATTCCAAA GGGCATGGCT
TTAGATATAA ATAGTATATG CATAAAAAGA ATGGGTTACT ATGATGAAAG AAGTAGTGAT
GTTACCAAGG ATTTTTGGGA GAGTAATAGA ATAAAGGCTG ATACCAAACA TTTAGAAATA
AATTTTGGTG ACATAAGATA TGAGAGATAT ACAATTATCT ATGAAACTCG TATTACTTCT
ACTGAAAGTG GATATTTAAA TGATGCTAAA TTATATTATG ATGATGATAA AGAGTTGCCT
TCAAAGCATT ATTCAAAGTT ATCAAAGGAT GCAGGAGCAT TAAATGTTTA TAAATATGTT
GATAAGACAA AGGTAACAAA TAATCCTAAT GACCAAAAAA TTAAATATGA TATTAAGTTT
GATTCCTATG GATACTTTTT TAAGGATACT TTAAATATTA TTGATAAATT AGATCCTAGA
CTAAGTGATA TTAAGATTAC GGCTACAGAT CAATTTATAA CTGATTTTTA TGAAAACACA
AAGGAATTAG TTATTAAAAA TAGTAATGGA GATATAGATG CTAAAAAGCC AGCATATATC
ACCATAGAAG CAAGTATGAA AAATGTAGGG CCAGGGGAAG TAGTAAAAAA TATTGCATAT
GTAAATGGAA ATCCAACTAA TGAGGTTTCA ACTAGAAAGA ATCCTATAGT GGAAATAATC
AAGGTTTCTA AAGACGATGT AGAATCAAAT TTACTTGAAG GAGCAGTTTT TAAACTAACA
ACTAAAGATG GTAAAACTGT TAAGGATGTG TACAACCAAT TGGTTAAAAC GTTTACAACA
AATTCTGAAG GGCCAATAAG GTTTGAATTA CCTAATGGAG ATTATAAATT AGAGGAAATA
AAGGCTCCTA ATGGATATAA ACTTGATCAA ACGCCTATTG AATTTACTGT AAATGATGAA
AGTAAGATAG TTAAGGTTGT GGCTAAGGAT GATCCTTTAT CAACTACTTG TAACTTAGTT
ATAAACAAAA TAAATGAAAA AGAAATTCCT ATTTTAGGAG CTAAATTTAA ATTATTTGAA
GAAAGTAATC CAAAAAAAGT TTTAAAATTT AGTTCTCAGA AAAATAATTA CGAATTAAAT
CAAAATGGAG TTGGGAAATT AACACCTTCA GGGAAAAATG CATCTTTTAA AATTAATAAT
TTACCTTATG GCAATTACAT ATTAAAAGAG GTACAGGCTC CTAAGGGATA TAAATTAAGT
GATGATATTT ATATAACTCT AGGTTTTGAA GAAAGTTTTT ATAGAGTTGG AAAAGAAGGA
GAAAAAATAA TTTTAAATAA AAATACAGAA ACAAATACAT ATGATATTTC AGTTAAAAAT
GTTCCAAGAA TAATACTACC TGAAACAGGA GGCTGTGGAA CTTCTAAATT TTCATTAATT
GGAATTACAC TTTTAGCAGG TGTATTAAGC ATAGTTAGTA CTACAAAATT TGTTTTAAAA
GAAAGGGAGA ATTAA
 
Protein sequence
MKNSKNFNIF TLWSVVISMI LIMISPGSIV LGEETKSVQN DGAVEITSTT FESNTVAKGI 
SNNLRIDYKI LNKDKLKDGD KIVISLPDIF KDIEPKCHDQ HFKDFDVKDG VVTLTFNENV
EKAVTGYMII RFVGNSNIRK GVSYPVSIDL NGKPSTVYIT GEEYSNSSSG GQYPLMYKTA
DLPTAATDKE QGREYYGEIV DRNKPIKYFV EINLGDGVNP NTRSYLSNAD FFDNIPKGMA
LDINSICIKR MGYYDERSSD VTKDFWESNR IKADTKHLEI NFGDIRYERY TIIYETRITS
TESGYLNDAK LYYDDDKELP SKHYSKLSKD AGALNVYKYV DKTKVTNNPN DQKIKYDIKF
DSYGYFFKDT LNIIDKLDPR LSDIKITATD QFITDFYENT KELVIKNSNG DIDAKKPAYI
TIEASMKNVG PGEVVKNIAY VNGNPTNEVS TRKNPIVEII KVSKDDVESN LLEGAVFKLT
TKDGKTVKDV YNQLVKTFTT NSEGPIRFEL PNGDYKLEEI KAPNGYKLDQ TPIEFTVNDE
SKIVKVVAKD DPLSTTCNLV INKINEKEIP ILGAKFKLFE ESNPKKVLKF SSQKNNYELN
QNGVGKLTPS GKNASFKINN LPYGNYILKE VQAPKGYKLS DDIYITLGFE ESFYRVGKEG
EKIILNKNTE TNTYDISVKN VPRIILPETG GCGTSKFSLI GITLLAGVLS IVSTTKFVLK
EREN