Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0136 |
Symbol | |
ID | 4204828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 165329 |
End bp | 166885 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642564691 |
Product | ABC transporter ATPase |
Protein accession | YP_697473 |
Protein GI | 110803156 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTT TAATAGTTAA AAATATGAAT CATGGCTTTG GAGATAGAGC TATATTTGAA GATGTGTCTT TCAGACTTTT AAAGGGGGAG CACGTTGGAC TTATAGGAGC AAATGGAGAA GGTAAATCAA CTTTCATGAA CATAATTACA GGTAAACTTA TGCCAGATGA GGGAGATGTT CAATGGAGTA ATAAGGTTAG AGTTGGTTAC ATGGATCAGC ATGCTCAGCT TGAGAAAGGT AAAACTATAA GAGAAGTTTT AAGAGAAGCA TTTCAGTATC TTTTTGATAT GGAAGTTGAA ATGAATGGTC TTTATGAGAG AATGGGTGAA ATGTCAGAGG ATGAGATAAC TAAAGCCTTA GAAAGAACAG CTACAATTCA AGATATGTTA GATCATAATG GATTTTATAT GATAGATGCA AAGGTTGAAG AAGTTGCAGC TGGATTAGGT CTTAGAGATG TTGGATTAGA CAAGGATGTT ACTGATTTAA GTGGAGGACA AAGAACTAAG GTTTTATTAG CTAAACTTTT ATTAGAAACA CCAGATATAT TACTTCTAGA TGAGCCTACA AACTACCTTG ATGAGGAACA TATAGCTTGG CTTAAGAACT ATTTAATAGG ATATGAAAAT GCCTTTATCT TAATATCACA TGATATTCCA TTCTTAAATA GTGTAGTAAA TGTAATATAC CATGTTGAAA ATAGAGCCTT AACTAGATAC ACAGGTGATT ATGATAACTT TATGAGAGTG TATGAAGCTA ACAAGAAGCA ATTAGAGGCT GCTTATGAAA GACAACAGGC TGAAATAGCT AAACTTGAAG ACTTCGTTGC TAGAAATAAG GCTAGAGTTG CTACAACAGG TATGGCAAGA GCTAGACAAA AGAAATTAGA TAAAATGGAT AGAATTGAGC TTGCTGCTGA GAAACCAAAA CCAGAGTTTA ACTTTAAGCA AGGAAGAACT TCAGGTAAAT TAATCTTTGA AGCAAGAGAC TTAGTTATAG GATATGATGA GCCACTTAGT AAACCACTTA ACATAAGAAT GGAAAGAGGC CAAAAAATAG CCTTAGTTGG AGCTAATGGA CTTGGAAAAT CAACACTTCT AAAAAGCTTA ATGGGATTAA TAAAACCAAT AAGCGGAGAG GTTGAAACAG GAGACTACCA AAGCATAGGA TACTTTGAAC AAGAAATAAA AGAAGCAAAC TATAATTCAT GTATAGAAGA AGTTTGGCAA GAGTTCCCAG GATACACTCA ATACGAAGTA AGAAGTGCCC TAGCTAAATG TGGATTAACA ACTAAGCACA TAGAAAGCTC AGTAGCAGTA TTAAGTGGGG GAGAACAAGC TAAGGTAAGA CTTTGTAAGC TAATAAACAA AGAAACAAAC ATACTTATCC TAGACGAGCC AACAAACCAT TTAGACGTTG AAGCTAAAGA CGAATTAAAG AGAGCATTAA AAGAATATAA AGGAAGCATA CTTTTAGTTT GCCATGAACC TGAATTCTAT AGAGATGTAG TAACAGATGT GTGGTCATGC GAAGATTGGA CTACTAAGAT TGTTTAG
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Protein sequence | MSILIVKNMN HGFGDRAIFE DVSFRLLKGE HVGLIGANGE GKSTFMNIIT GKLMPDEGDV QWSNKVRVGY MDQHAQLEKG KTIREVLREA FQYLFDMEVE MNGLYERMGE MSEDEITKAL ERTATIQDML DHNGFYMIDA KVEEVAAGLG LRDVGLDKDV TDLSGGQRTK VLLAKLLLET PDILLLDEPT NYLDEEHIAW LKNYLIGYEN AFILISHDIP FLNSVVNVIY HVENRALTRY TGDYDNFMRV YEANKKQLEA AYERQQAEIA KLEDFVARNK ARVATTGMAR ARQKKLDKMD RIELAAEKPK PEFNFKQGRT SGKLIFEARD LVIGYDEPLS KPLNIRMERG QKIALVGANG LGKSTLLKSL MGLIKPISGE VETGDYQSIG YFEQEIKEAN YNSCIEEVWQ EFPGYTQYEV RSALAKCGLT TKHIESSVAV LSGGEQAKVR LCKLINKETN ILILDEPTNH LDVEAKDELK RALKEYKGSI LLVCHEPEFY RDVVTDVWSC EDWTTKIV
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