| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0084 |
|---|
| Symbol | |
|---|
| ID | 4204178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 99856 |
|---|
| End bp | 101676 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642564633 |
|---|
| Product | pullulanase |
|---|
| Protein accession | YP_697423 |
|---|
| Protein GI | 110802434 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAG TTTATATTTA TCATGATTCT CAAGGTACCT TTTATAGGGA ACCTTTTGGA
GCAGTTTCTG TAGGTTCTAA GGTAAGTTTA AGATTAGAAT GCAAAGAGTG TGGAGAAGTT
TTTATAGAGG TAATAAAGTT TGATGGAAGT AGATATTTAA TACCTATGAC AATTGAAGAG
AGAAGAAATG AATGCATAAT TTATAAAGGA ATAATAGACA CTACAAACTC CTTAGGAGTA
ATAAATTATT ACTTTAAATA CATTAAGGAT GGATTTACTA AGTATTATGG AAATAATGAT
GAGTGTTTAG GAGGAGAGGG AAAGATATAC TATGATTTTC CTAATTATTA TCAAATAACA
GTTTATGAGG ATAATAAAAT TCCTAGTTGG TATAAGGAAG GTATTATTTA TCAGATATTT
GTGGATAGAT TTTTTAATGG AAATAAGGAT AGTATGATAT TAAATAAAAA GAAAAATAGC
TTTATATATG GTAATTGGTA TGATGAGCCA ATGTATATAA GAGATAGTAA TGGAAATATT
AAACGGTGGG ATTTTTATGG AGGGAATTTA AGGGGAGTAA TTGAAAAATT AGATTATATA
AAATCTTTAG GGGTAAATAT TATATACATG AATCCAATCT TTGATGCTGT GAGTTGTCAT
AAATATGATA CTGGAGATTA TGAAAATATT GATAAGATGT ACGGAACTAA CAGTGATTTT
AATGAATTGT GCCAAAAAGC TGAGGAAAAA GGTATAAGGA TAATATTAGA TGGAGTTTTT
AGTCATACAG GATCAGATAG TAGGTACTTT AATAAATACG GAAACTATGG AGAGCTGGGA
GCCTATGAAT CTAAATACTC TAAATATTAT AATTGGTATA GGTTTTATGA TTATCCTAAT
AGTTATGAAT GTTGGTGGGG TTTTGAAAAC CAGCCTAATG TAGAGGAATT AGAAAAGACA
TATTCAGATT ATATAGTTAA TAGTGAAAAT TCAATAATAG CGAAGTGGCT TAGATTAGGA
GCAAGCGGAT GGAGGTTAGA TGTAGCAGAT GAACTTCCAG ATGAATTCAT ACAAATGATT
AAGGAAAGGA TGAAAAATGA GAAAGAAGAT AGTGTGCTTA TAGGAGAGGT TTGGGAAGAC
GCTTCAAATA AGGTTAGCTA TTCAAAAAGA AGAAAGTATT TATTAGGAAA TGAATTAGAT
TCTGTAACAA ATTACCCTTA TAGAGATATA ATTTCTAATT TTTTAAATGA AGAAATAAGT
TCAAAGGATT TTTATAAAGT AATAATGAGC ATAAAAGAAA ATTATCCAAG AGAAAATTTT
TTTGCAAACA TGAATATTCT AGGTAACCAT GACACAGAAA GAATACTTAC AGTATTAAAA
GAGAATTTAA ATAAGTTAAA ATTAGCCCTA TGTCTTCAAA TGACTTTACC TGGAGTTCCC
TTAATTTATT ATGGTGATGA GGCAGGACTT TTAGGAAATA AGGATCCTGA AAATAGAAAG
ACCTATCCTT GGGGACGAGA AAATAAGGAA ATATTAAGTT ATTATAGTTT TTTCGGAAAC
TTTAGAAAGA ATGAAGAGGT TTTAAGAAAG GGAGATTTTT ATATTTTTAA GGATACACCT
GAGGATATCA TTGCTTTTAA GAGAGTTTAT AAAGATAAAG AAATGATAAT TATAGTAAAC
AGGAGTAATT CTAGAAAAAC CATAACCTTA GATAGCGAGA AAAGAAGATA TAAAGATAAA
TTTTCTAAGG AAGAATTTTA TGGTGATGGT AGCATTACTT TAGAGGTAGA AAGAGAAAAT
TATAAAATTT TAACTAATTA G
|
|---|
| Protein sequence | MGKVYIYHDS QGTFYREPFG AVSVGSKVSL RLECKECGEV FIEVIKFDGS RYLIPMTIEE
RRNECIIYKG IIDTTNSLGV INYYFKYIKD GFTKYYGNND ECLGGEGKIY YDFPNYYQIT
VYEDNKIPSW YKEGIIYQIF VDRFFNGNKD SMILNKKKNS FIYGNWYDEP MYIRDSNGNI
KRWDFYGGNL RGVIEKLDYI KSLGVNIIYM NPIFDAVSCH KYDTGDYENI DKMYGTNSDF
NELCQKAEEK GIRIILDGVF SHTGSDSRYF NKYGNYGELG AYESKYSKYY NWYRFYDYPN
SYECWWGFEN QPNVEELEKT YSDYIVNSEN SIIAKWLRLG ASGWRLDVAD ELPDEFIQMI
KERMKNEKED SVLIGEVWED ASNKVSYSKR RKYLLGNELD SVTNYPYRDI ISNFLNEEIS
SKDFYKVIMS IKENYPRENF FANMNILGNH DTERILTVLK ENLNKLKLAL CLQMTLPGVP
LIYYGDEAGL LGNKDPENRK TYPWGRENKE ILSYYSFFGN FRKNEEVLRK GDFYIFKDTP
EDIIAFKRVY KDKEMIIIVN RSNSRKTITL DSEKRRYKDK FSKEEFYGDG SITLEVEREN
YKILTN
|
|---|
| |