Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0081 |
Symbol | glgB |
ID | 4204755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 93524 |
End bp | 95548 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564630 |
Product | glycogen branching enzyme |
Protein accession | YP_697420 |
Protein GI | 110802271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAG TAGAAGTAAA AGATGATAAA TTAGAGATAA AACCTGTTAG ATTGAGAAAA GAAAAATATA AAGCACAATT AGAAAATAAA ATTTTTAATG AAGATGAGTT ATATTTATTT CATGAAGGGC GAAATTATAA TGCTTATAAT TTTATGGGAG CTCATTTTAC TAGTGAAAAT AGAAAACGAG GGGTAAGATT TACCCTTTGG GCTCCAAGGG CAAAGAATAT TTTTTTAGTT GGAGATTTTT CAAATTGGGA GACAAAAGAA GAAAATAAAC TTAATAGAAT AAATGAAACA GGGCTTTGGA GTATTTTTAT ACCTAGATTA AAAGAGGGAA TTAAGTATAA GTATTATATT GAACAAGAAG ATGGAAAAGC AGTATTAAAG GCTGATCCTT ATGGAATTTA TTCAGAGGTA AGACCTAATA CTGCTTCTAT TTTATGCGAA AAAACTAAAA TAAGATGGTC AGATAAAAAG TGGTTAAATA AAAGAGAAGC AACTAATTAT TTTGAAAGTC CTATTAATAT ATATGAATTA CACTTAGGCT CATGGAAAAG AAAAGATGAG GATGAGTTTT TATCTTATGA TGAATTAAGT GTGGTTTTAC CTAAGTATGT TAAGGAAATG GGATATACTC ATGTTGAATT TATGCCATTA AATGAGCATC CATTAGATGC CTCTTGGGGG TATCAGGTTA CAGGATATTA TTCAGTAACA AGTAGATATG GAGATATTAA GGGATTAAAA AGGTTAATAA ATGCCCTTCA TAAAAATGAT ATAGGAGTTA TTTTAGATTG GGTACCAGGT CATTTTTGTA AGGATGAACA AGGATTATAT ATGTTTGATG GTACACCAAC TTATGAATAT GAGGAAAAGT GGAAAGCTGA TAATAAAGGA TGGGGAACTT TTAATTTTGA TTTGGGAAAA CCAGAAGTAA AAAGCTTTTT AATTTCTAAT GCTTTTTACT TTATAAATGA ATTTCATATA GATGGATTAA GGGTTGATGC TGTTTCTAAT ATGCTTTACT TAAATTATGG AAGAAATCAT GGAGAATGGA TTCCTAATAT ATATGGAGGA AATGAAAATT TAGAAGCTAT TCAATTTATA AAAGAGCTTA ATGAGGCTAT AAAAACTTAT AGCAAAGGGG TAATTACAAT TGCAGAAGAA TCAACATCTT GGCCTAATGT GACTAATGAT ACTGAATATG GCGGCTTAGG ATTTGATTTT AAATGGAATA TGGGTTGGAT GAATGACACT TTAGAATATA ATGAGTTAGA TCCTATATAT AGAAAGTATC ATCATAATAA ATTAACTTTC CCTATGATGT ACAATCATTC AGAGAAATTT ATATTACCTA TATCTCATGA TGAAGTTGTT CATGGGAAAA AATCTCTTAT AGATAAAATG CAGGGAGATT ATTGGAATAA GTTTTCTAAT TTGAGAGCGT ATATGGCATA TATGTATGGT CATCCAGGGA AAAAACTTAT GTTTATGGGA TGCGAATTTG GACAGTTCAT AGAGTGGAGA GAATATGAAG AGCTTGAGTG GAAGTTAATT GATAAGTTTG ATATGCATAG AAAAACTCAT AATTTCTTTA AGGATTTAAA TAACTTTTAT AAAAATAATT CTGAGCTTTG GGAATTAGAT TATGATGGAG ATGGATTTCA ATGGATTGAT GCTGATAATA ATGAACAAAG CATATATATT TTTATAAGAA AAAGTAAAAA TATAGAAAAG TATAAAATAT TTGTATGCAA TTTTACTCCA ATGGTTTATT ATGATTTTAA TATAGGAGTT CCTGAAAAGG GAGTTTATAG AGAAATTTTC AATACAGATA AGAAAGAATA TGGTGGTTCT GGACAAGTTA TTAAAGGGAA TTTATTCTCA AGAAAAGGTT GGTGCCATAA TCAGCCATAT ACTTTAACCA TAAAGGTTCC GCCAATGGCA GTTTCTGTTT TTGAAAGAAT AATTGAAGAA AATAAAACAG AAGAAAAGAT AGTAAAAGAA GATAAATATA TTTAA
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Protein sequence | MTLVEVKDDK LEIKPVRLRK EKYKAQLENK IFNEDELYLF HEGRNYNAYN FMGAHFTSEN RKRGVRFTLW APRAKNIFLV GDFSNWETKE ENKLNRINET GLWSIFIPRL KEGIKYKYYI EQEDGKAVLK ADPYGIYSEV RPNTASILCE KTKIRWSDKK WLNKREATNY FESPINIYEL HLGSWKRKDE DEFLSYDELS VVLPKYVKEM GYTHVEFMPL NEHPLDASWG YQVTGYYSVT SRYGDIKGLK RLINALHKND IGVILDWVPG HFCKDEQGLY MFDGTPTYEY EEKWKADNKG WGTFNFDLGK PEVKSFLISN AFYFINEFHI DGLRVDAVSN MLYLNYGRNH GEWIPNIYGG NENLEAIQFI KELNEAIKTY SKGVITIAEE STSWPNVTND TEYGGLGFDF KWNMGWMNDT LEYNELDPIY RKYHHNKLTF PMMYNHSEKF ILPISHDEVV HGKKSLIDKM QGDYWNKFSN LRAYMAYMYG HPGKKLMFMG CEFGQFIEWR EYEELEWKLI DKFDMHRKTH NFFKDLNNFY KNNSELWELD YDGDGFQWID ADNNEQSIYI FIRKSKNIEK YKIFVCNFTP MVYYDFNIGV PEKGVYREIF NTDKKEYGGS GQVIKGNLFS RKGWCHNQPY TLTIKVPPMA VSVFERIIEE NKTEEKIVKE DKYI
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