Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0079 |
Symbol | |
ID | 4206352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 91596 |
End bp | 92918 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642564628 |
Product | putative amino acid permease |
Protein accession | YP_697418 |
Protein GI | 110803423 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAC CTAAATTAAA AAAGGAAATA GGATTGTTTA CGGCTACAGC TTTAGTAGTT GGTAATATGA TGGGATCTGG TATATTTATG CTTCCATCTA GTTTAGCAGG TGTGTCTGGT CCTGGTTCAA CTATAATGGC GTGGTTATTA ACGGGATTAG GTTCTTTGAT TTTGGCATTA ACGTTTGCTA ACTTAGGTTC AAAAATTCCG AAAACAGGAG GAACTTATGA ATATTCTAGA CTAGCTTACG GAAATTTTAT GGGATTTATG ACGGCGTGGC TTTATTGGAA TGGATCTTGG ATTGGAAATG CTACTATTTT TATAGTTATT ACTACTTATT TAGGTGAAGT TATAACAAGT TTAACTAATT CATCAATAAT AGGTTTCTTA TTCTGTTCTT CTATCTTATG GATTTGTACA TATATAAATA TAAGAGGAAC AAAATTAGCT GGTAGAGTAG CTTCAGTAAT AACTGTTTTT AAAGTTTTAT TATTTATATT CTTCATAGTT GTTGGATTAA TTTACTTTGA TCCGTCAAAT TTAACACCAA TGTTTCCAGA AGGAAAGGGT GTTTCAACTA TTCCTGTAGC AGCATCTTTA ACTTTATGGG CATTTATGGG CTTAGAAACT GCATCTGTAG CAGGAGGAGA AATAAAAGAT CCTGAAAAAA ATGTTAAGAG AAGTACTATA TTAGGTATGT TAATTAGTAC TGTTTTATAT ATATTAATAA GTGTTGTAGC TATGGGAGTT ATGAGTCAAA GTGAATTAGC TTCAAGCACT GCTCCTATTT CTGATATAAT AGTTAAAGTT TTAAATTTAA AGAGTTTAAA TTTCTTAAAT ATAGCTATAG CTATTAGTAT TTTAGGTACA GCTATGGGAT GGCTATTATC AACTGCTAGA GTTGGATATG CTGCTGGAGA GGATGGAATT TTCCCTAGTG TATTTGCTAA GGTACATCCT AAATATAATA CTCCATATGT AGCTTTGATA ATAGGAAGTA TATTTATAAA TATTATATTC TTAATGAATT TTACTAAGGG TCTAGCAGGT GCATATAGCT TTATAGTTGT ATTGGCTACT TTAAGTTATT TGCCAATATA TGCGATTTCA ACTATTGCAG AGATAATACT TATGGTTAAA GAAGATAAGA AACCTTCATT CAAAAAACAT TTAGGTTTAA TAACAAGATG TTTAATAGGT TTTGCTTTTG CAATTTGGGC AATATATGCT TCAGGAGCTG AAATAGTAAT GTATGGATTT ATTTTAATAT TACTAGGAGT TCCGATTTAT GGGTATATGA GCATAAAAAA ACACTTCCGA TAA
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Protein sequence | MGKPKLKKEI GLFTATALVV GNMMGSGIFM LPSSLAGVSG PGSTIMAWLL TGLGSLILAL TFANLGSKIP KTGGTYEYSR LAYGNFMGFM TAWLYWNGSW IGNATIFIVI TTYLGEVITS LTNSSIIGFL FCSSILWICT YINIRGTKLA GRVASVITVF KVLLFIFFIV VGLIYFDPSN LTPMFPEGKG VSTIPVAASL TLWAFMGLET ASVAGGEIKD PEKNVKRSTI LGMLISTVLY ILISVVAMGV MSQSELASST APISDIIVKV LNLKSLNFLN IAIAISILGT AMGWLLSTAR VGYAAGEDGI FPSVFAKVHP KYNTPYVALI IGSIFINIIF LMNFTKGLAG AYSFIVVLAT LSYLPIYAIS TIAEIILMVK EDKKPSFKKH LGLITRCLIG FAFAIWAIYA SGAEIVMYGF ILILLGVPIY GYMSIKKHFR
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