| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0060 |
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| Symbol | |
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| ID | 4206550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 64677 |
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| End bp | 65807 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 23% |
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| IMG OID | 642564603 |
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| Product | hypothetical protein |
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| Protein accession | YP_697402 |
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| Protein GI | 110801801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGTA ATAACTTAAT TCTAGATAAA TACAAGTCTA GAGGGATTAG AGGATTAATA
GTTTTAGGGA TAGCTTATTT CTTTTTAATG GGAAATTACA GTATGATAAG ATACTTTTTT
CAGGCAGGGC AAGGGGATTT AGATATTTCC ATAATAAATA AATGTTTTTC AATGGGTAGT
GTAGATAAAT TTTTATTATT TTTATTTTTA GTTTGGAGTG TTGGATTTTT ATTTCAGGAT
AAAGAAAAGG AGCTAAAGGA AAATTTAGCT GTGGGAGAGG AGAATACAAA AAAATATTTC
TTTTCTAAAG TTATTTTAAT TTATGGAGTT TCTCTAATAC CTATGCTAAT CAACATATTT
ATAAAATTAA TTTTTTATAT ACCATATAGG AATTCTTTTA GTTTAGATAA GCTTATTATA
AGTTTTCTTT ATTTCATAGC ATTAGGATTA TTATTTACTT CAATAATTTT TATTATGAAT
TTAATTGTTA AGGATAGAAT GTTTGCTGGG GTATTTCCAA TATTCTTTAT GGAGGGTTTA
ATTTTAATCT TTTCAGTAAG TGAGCTTTTA ATTAGTGATA AACTTATTTG GGTTAGAAAT
TCTTTAGGTT TTATTGGTGA GAAAGTCTTA TTAATTTTTA ATTTATTAAA TTTAAATTTT
GATACCAATT CTTTTTATTT AGGGAGACAG TTTATATTTA TAATAATCTT AGTGTTAATT
TCAGTATTAC TTATTTATCT TTCAAGATTA ATTTTAAAAA TAATGAATTT TAAATATTTA
TATAGACCAT ATTTCTTTGA AATACCTAGA TATTTTATTT ATATTTCTAT GAGTATACTA
ATTGGATTTG TATTTGTACA TGCCGTAGGC TATTTAATTA TAATGTTTAT TCCAAGTGTA
AGTTATGTTA ATGGAACATT TATGGTCAAC ATTGCATCTT TAATTTCTAT GGTTTTATTA
TTTATCTTTT TAGATGTTTT ATATAAAAGA AAGATATTAA ATAAGGATTT GTTAGAAGAT
GATATTAAAG TATGCAATGA GATTCAACCT TGTATAGGTG ATTTTGTTAT ATTGGATAAA
ACTACAGGGT TTTTAGATAA TAAGACAATT GATAAGGAAG AAAATTTTTA A
|
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| Protein sequence | MKSNNLILDK YKSRGIRGLI VLGIAYFFLM GNYSMIRYFF QAGQGDLDIS IINKCFSMGS
VDKFLLFLFL VWSVGFLFQD KEKELKENLA VGEENTKKYF FSKVILIYGV SLIPMLINIF
IKLIFYIPYR NSFSLDKLII SFLYFIALGL LFTSIIFIMN LIVKDRMFAG VFPIFFMEGL
ILIFSVSELL ISDKLIWVRN SLGFIGEKVL LIFNLLNLNF DTNSFYLGRQ FIFIIILVLI
SVLLIYLSRL ILKIMNFKYL YRPYFFEIPR YFIYISMSIL IGFVFVHAVG YLIIMFIPSV
SYVNGTFMVN IASLISMVLL FIFLDVLYKR KILNKDLLED DIKVCNEIQP CIGDFVILDK
TTGFLDNKTI DKEENF
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