| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0056 |
|---|
| Symbol | |
|---|
| ID | 4204080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 62571 |
|---|
| End bp | 62909 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642564599 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_697398 |
|---|
| Protein GI | 110801488 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAG GTGGATTTCC AGGCGGAATG GGAAACATGA ATAATTTAAT GAAGCAAGCA
CAAATGCTTC AAAAACAAAT GCAATCAATG CAAGAGGAAA TCGAAGCATC AGAATTCGAA
GGCTCAGCTG GCGGTGGTGC AGTTGTTGCA AAAGTTAACG GAAAGAAAGA ATTAATCGCA
CTTAATATAA AGCCAGAAGT TGTAGATCCA GATGATGTTG AAATGTTAGA AGATCTAGTT
TTCTCAGCTG TTAAGCAAGC TTTAGAAAAA GCTTCTGAAG AAACTTCAGA AAAAATGGGT
AAATTAACTG GTGGAATGGG AATGCCAGGA TTATTCTAA
|
|---|
| Protein sequence | MARGGFPGGM GNMNNLMKQA QMLQKQMQSM QEEIEASEFE GSAGGGAVVA KVNGKKELIA
LNIKPEVVDP DDVEMLEDLV FSAVKQALEK ASEETSEKMG KLTGGMGMPG LF
|
|---|
| |