Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0029 |
Symbol | pepT |
ID | 4205636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 37264 |
End bp | 38484 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564572 |
Product | peptidase T |
Protein accession | YP_697374 |
Protein GI | 110803414 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TTCATGAAAG ATTTTTAGAA TATGTAAAAG TAGATACTAA ATCAGATGAA ACAACAAGGG TTACTCCTAG TACAAAAGGT CAATTAGAAT TAGGAAAAAT CCTTGCAGAG GAATTAAAGA AAATCGGAGT AGATGAAGTA AGAATAAGTG ATAAAGGATA TGTATATGCT TGTTTAAAGA GTAATTGTGA TAAGGATATT CCGAAAATAG GATTTATTTC ACATATGGAT ACTGCACCAG ATATGAGTGG AAAAAATGTT AATCCTAAAA TTGTTGAAAA TTATGATGGT AAAGATATTG AACTTGGAAA TGGATATACA TTATCACCAA GTTTTTCACC AGAACTTCCA ATGTATAAAG GGCAAACTTT AATAACTACT GATGGAACTA CTCTTTTAGG TGCTGATGAT AAGGCTGGGG TAGCAGAAAT AATAACAGCT ATTGAATATT TAATAAATCA TCCAGAAATA AAACATGGTG ATATTAAAAT AGGATTTACT CCAGATGAAG AAATTGGAGA AGGCGCAGAT CATTTTGATG TTGAAGGCTT TGGAGCAGAT TTTGCTTACA CACTAGATGG TGGAAGAATA GGTGAATTAG AATATGAAAA CTTTAATGCT GCAAGTGCTA AGGTTGAAAT AATAGGTAAA AATGTTCACC CAGGAAGTGC TAAAGGAAAA ATGATCAACT CTATTTTAGT TGCTCATGAA TTTGTTTCTA TGCTTCCTTT AAATGAAGTT CCAGAAAAAA CAGAAGGATA TGAAGGTTTC TCATTCTTAT TAGATATACA AGGTGAAGTA GAAAAAACTT CATTATCATT TATAATAAGA GATTTTGATA AAGAAGGATT TAAAAATAGA AAAGAAAGAT TTAATGAAAT AGCTAATGAA TTAAATAAAA AATATGGAGA AGGTACTGTT ACAGTAACTT TAAAAGATCA ATACATGAAC ATGAAGGAAA TGATAGAACC TAGAATGCAT ATTGTAGAAA CTGCTGAAAA AGCAATGAAA CAATGTGGAA TTGAGCCAAT CAAAAAGCCT ATAAGAGGAG GTACTGATGG GGCAAGATTA TCATTTATGG GACTACCAAC ACCAAATATA TTTACTGGTG GAGAAAACTT CCATGGAAGA TATGAATATA TATCAGTAAA TTCAATGGAA AAAGCTGTTG AAGTAATACT GAATATAATA AAAATTTATG CTGAAAAATA A
|
Protein sequence | MKKVHERFLE YVKVDTKSDE TTRVTPSTKG QLELGKILAE ELKKIGVDEV RISDKGYVYA CLKSNCDKDI PKIGFISHMD TAPDMSGKNV NPKIVENYDG KDIELGNGYT LSPSFSPELP MYKGQTLITT DGTTLLGADD KAGVAEIITA IEYLINHPEI KHGDIKIGFT PDEEIGEGAD HFDVEGFGAD FAYTLDGGRI GELEYENFNA ASAKVEIIGK NVHPGSAKGK MINSILVAHE FVSMLPLNEV PEKTEGYEGF SFLLDIQGEV EKTSLSFIIR DFDKEGFKNR KERFNEIANE LNKKYGEGTV TVTLKDQYMN MKEMIEPRMH IVETAEKAMK QCGIEPIKKP IRGGTDGARL SFMGLPTPNI FTGGENFHGR YEYISVNSME KAVEVILNII KIYAEK
|
| |