Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0026 |
Symbol | |
ID | 4205554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 33505 |
End bp | 34773 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642564569 |
Product | polyA polymerase family protein |
Protein accession | YP_697371 |
Protein GI | 110802983 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC CTAACAATGT ACAATATATC TTAGAGAAAT TTGACTCTAA TGGTTTTGAA GCCTTTATAG TTGGTGGTTG TGTAAGAGAT TCTTTATTAA ATAAAAAACC TCAAGATTAT GATATTACAA CCAATGCATT CCCTGAAAAA ATAGAAGAGC TTTTTGATAA AACTATCCCT ACTGGTATTA AACATGGAAC AGTAACAGTT TTAATCGACA AAACTCCTTA TGAAGTAACT ACTTATAGGG TAGATGGGGA ATATTTAAAT AATAGAAAGC CTAAAGACGT AAAGTTCGTT TCTAATATAG AAGAAGATTT ATCAAGAAGA GATTTTACTA TAAATGCAAT GGCATATAGC CCATATTTAG GATTTAAGGA TTGTTTTAAT GGAAAAGAGG ATCTAAAAAA CAAATTAATA AGATGCGTTG GAGATCCTGA TAAACGCTTC TCTGAAGATG CCTTAAGAAT GCTTAGAGCA ATTAGATTTA GTTGTCAATT AAACTTTAAA ATAGAAAAAT TAACTGCTGA ATCTATAAGA AAGAATTTTA AATTAATAAA AAATATAAGC ATGGAAAGAA TTCAAAGTGA ATTTACTAAA ATCATTCTAA GCAATGAGCC TGATAGAGGT CTTATGCTTC TTAGAAAGCT AGGATTTTCT GACTTTTTAG TTAAGGAATT TAAGAATTTA AAACTAATAA ATTGCTATGA TTTATATGAT GATATTCATG ATACTTATGG ATTAATAAAT TCACTTCCTA AAAAGCTTCA TGTAAGATTA GCAGGATTAT TCTATAAGGT TTTTAATTCT GAAAATGCAG TTGAGAAGTG CAGAACTATA TTAAAGAAAC TTAAATATGA TAATAATACA ATCAACGATA CTTGCAACTT AGTAGAAAAT ATAAATAGTA TTTCATGTAA TATGACAAGA AAAAAACTAA AACTACTTAT AAATTCAGTT GGAACCGAAA ATATCTTTGA TTTATTAGAT TTACAAAAAT CATATTTATC TTATATGGAT GAATATGATA CTGAGTGTAT AGATATATTA AAAAATAGAG TTTCTGATAT ATTAGCTTCA AAAGAACCCA TATTTATTAA GGACTTAGCC ATAACAGGAA ATGACTTAAT TACCGAACTT AATTTTAAAC CTGGAAAAAA TATAGGTGTT ATATTAAATT TTCTTCTTGA AAATGTAATG CAAACACCAG AGTTAAACAA TAAGGAAGAC TTACTAAACC TTAGTAAGCA ATTTTATTCA TATAATTAA
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Protein sequence | MKLPNNVQYI LEKFDSNGFE AFIVGGCVRD SLLNKKPQDY DITTNAFPEK IEELFDKTIP TGIKHGTVTV LIDKTPYEVT TYRVDGEYLN NRKPKDVKFV SNIEEDLSRR DFTINAMAYS PYLGFKDCFN GKEDLKNKLI RCVGDPDKRF SEDALRMLRA IRFSCQLNFK IEKLTAESIR KNFKLIKNIS MERIQSEFTK IILSNEPDRG LMLLRKLGFS DFLVKEFKNL KLINCYDLYD DIHDTYGLIN SLPKKLHVRL AGLFYKVFNS ENAVEKCRTI LKKLKYDNNT INDTCNLVEN INSISCNMTR KKLKLLINSV GTENIFDLLD LQKSYLSYMD EYDTECIDIL KNRVSDILAS KEPIFIKDLA ITGNDLITEL NFKPGKNIGV ILNFLLENVM QTPELNNKED LLNLSKQFYS YN
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