Gene CPR_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0003 
Symbol 
ID4204306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp3129 
End bp3335 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content29% 
IMG OID642564543 
ProductS4 domain-containing protein 
Protein accessionYP_697354 
Protein GI110802524 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02988] S4 domain protein YaaA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAG TAAAAATTAA TACAGAGTTT ATAAAGTTAG ATTCATTTTT AAAATGGTGT 
GGAGCAGTTA GCTTAGGATC AGAAGCTAAA ATGTTCATAA TGGACGGAGA AGTTTTAGTA
AATGGTGAAG TATGTACTCA AAGAGGAAAA AAATTAAGAG TTGATGATAC TGTAGAGTTC
AATGGGGAAA TTTATAAGTT AATTTAA
 
Protein sequence
MQEVKINTEF IKLDSFLKWC GAVSLGSEAK MFIMDGEVLV NGEVCTQRGK KLRVDDTVEF 
NGEIYKLI