Gene CPF_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_3005 
SymbolrrlC 
ID4202964 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp84083 
End bp86990 
Gene Length2908 bp 
Protein Length 
Translation table 
GC content51% 
IMG OID640716573 
Product23S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCAAGCTAC AAAGGGCGCA TGGTGAATGC CTTGGCATCA GGAGCCGATG AAGGACGTGA 
TAAGCTGCGA TAAGCTTCGG GTAGGCGCAC ATAGCCTGAG ATCCGAAGAT CTCCGAATGA
GGAAACTCAC ATGGGAAACC CCATGTATCA TTAAGTGAAT ACATAGCTTA ATGAAGGTAA
CCCAGGGAAC TGAAACATCT AAGTACCTGG AGGAAGAGAA AGAAAAATCG ATTTTCTTAG
TAGCGGCGAG CGAAAGGGAA AGAGCCCAAA CCGGAAACTT GTTTCCGGGG TTGTGGACAT
AGCATAAAAG TGGAGGCTAT TGTAACTGAA GAGAACTGGA AAGTTCCACC GTAGAAGGTA
ATAGTCCTGT AAGTGAAACG AGAAGACCAC GAGTTATGAT CCAGAGTACC ACGAGACACG
TGAAACCTTG TGGGAAGCAG GGAGGACCAC CTCCCAAGGC TAAATACTAC CTGATGACCG
ATAGTGAAGC AGTACCGTGA GGGAAAGGTG AAAAGAACCC CGGGAGGGGA GTGAAATAGA
ACCTGAAACC GTGTGCCTAC AACCGCTCAG AGCCCCTTAT GAGGGTGATG AGGTGCTTTT
TGTAGAACGA GCCAACGAGT TACGGTATGT AGCAAGGTTA AGTACTTAAG GTACGGAGCC
GAAGGGAAAC CGAGTCTGAA TAGGGCGACT AGTTGCATGC CGTAGACCCG AAACCGGGTG
ACCTATCCAT GGCCAGGTTG AAGCGAGGGT AAAACCTCGT GGAGGACCGA ACCACGTTGC
TGTTGAAAAA GCATGGGATG AGCTGTGGAT AGCGGAGAAA TTCCAATCGA ACCCGGAGAT
AGCTGGTTCT CTCCGAAATA GCTTTAGGGC TAGCGTCGAG TATGAGTAGT GGAGGTAGAG
CACTGAATGG GCTAGGGGGC ATAGCGCTTA CCGAACCTTA TCAAACTCCG AATGCCACAT
ACTTTGAGCT CGGCAGTCAG ACTACGAATG ATAAGATCCG TGGTCAAAAG GGAAACAGCC
CAGATCGTCA GCTAAGGTCC CAAAGTGTAA GTTAAGTGGG AAAGGATGTG AGATTTCTAA
GACAACTAGG ATGTTGGCTT AGAAGCAGCC ATTCATTAAA AGAGTGCGTA ATAGCTCACT
AGTCGAGAGA TCTTGCGCCG AAAATGTAAC GGGGCTAAAC TTACCACCGA AGCTACGGGC
TTGAACTTAG TTCAAGCGGT AGGAGAGCGT CGTAACCGGG CTGAAGTCGT ACCGTAAGGA
GCGGTGGACT GGTTACGAGT GAGAATGTTG GCATCAGTAG CGAGATGTGG GTGAGAATCC
CACAGGCCGA AAACCTAAGG TTTCCTCAGG AAGGTTCGTC CGCTGAGGGT TAGTCGGGAC
CTAAGCCGAG GCCGAAAGGC GTAGGTGATG GACAACTGGT TGATATTCCA GTACCACTAT
AATCGTTATT ATCGATGGCG TGACGCAGGA GGATAGTGTG TGCTAGCTAT TGGATGCTAG
TCTAAGCGTT TAGGCAGTGA GAGTAGGCAA ATCCGCTCTC ATAATGCTGA GGCGTGATGG
GGAAGGTTCT ACGGAACCGA AGTACATGAT TCCACGCTGC CAAGAAAAGC GTCTAGAGAG
AGAAGTAGTG CCCGTACCGC AAACCGACAC AGGTAGGTGA GGAGAGAATC CTAAGGCCGG
CGGAAGAATT ACAGTTAAGG AACTCGGCAA ATTGACCCCG TAAGTTCGCG AGAAGGGGTG
CCTACGAGAG TAGGCCGCAG AGAATAGGCC CAAGCAACTG TTTAGCAAAA ACACAGGTCT
CTGCTAAAGC GTAAGCTGAT GTATAGGGGC TGACGCCTGC CCGGTGCTGG AAGGTTAAGG
GGAACACTTA GCGCAAGCGA AGGTGTGAAC TTAAGCCCCA GTAAACGGCG GCCGTAACTA
TAACGGTCCT AAGGTAGCGA AATTCCTTGT CAGGTAAGTT CTGACCCGCA CGAATGGCGT
AATGACTTGG GCACTGTCTC AACTGTAAAT CCGGCGAAGT TGTAGTGCGA GTGAAGATGC
TCGCTACCCG CGATTGGACG GAAAGACCCC GTAGAGCTTT ACTGTAGCTT AGCATTGAGT
TTTGGTATTG TCTGTACAGG ATAGGTGGGA GACTAGGAAA CCAGGGCGTC AGCCTTGGTG
GAGTCAACCT TGGGATACCA CCCTGACAGT ACTGAAATTC TAACTGGCGG CCATGAATCT
GGTCACAGGA CATTGTTAGG TGGGCAGTTT GACTGGGGCG GTCGCCTCCT AAAAAGTAAC
GGAGGCGCCC AAAGGTTCCC TCAGAACGGT CGGAAATCGT TCGAAGAGTG CAAAGGCAGA
AGGGAGCCTG ACTGCGACAC CCACAAGTGG AGCAGGGACG AAAGTCGGGC TTAGTGATCC
GGTGGTACCT CGTGGGAGGG CCATCGCTCA ACGGATAAAA GCTACCTCGG GGATAACAGG
CTGATCTCCC CCAAGAGTCC ACATCGACGG GGAGGTTTGG CACCTCGATG TCGGCTCGTC
GCATCCTGGG GCTGAAGTAG GTCCCAAGGG TTGGGCTGTT CGCCCATTAA AGCGGCACGC
GAGCTGGGTT CAGAACGTCG TGAGACAGTT CGGTCCCTAT CCGTCGCGGG CGTAGGAAAT
TTGAGAGGAG CTGTCCTTAG TACGAGAGGA CCGGGATGGA CTGACCTCTG GTGTACCAGT
TGTTCCGCCA GGAGCACAGC TGGGTAGCTA AGTCGGGAAT GGATAAACGC TGAAAGCATC
TAAGCGTGAA GCCAACCTCA AGATGAGATT TCCCATAGCG TAAGCTAGTA AGATCCCTTG
AAGAACACAA GGTTGATAGG TCGGGGGTGT AAGCATGGTA ACATGTTCAG CTGACCGATA
CTAATAGATC GAGGGCTTGA CCAAATAT
 
Protein sequence