| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2980 |
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| Symbol | |
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| ID | 4201425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 3241973 |
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| End bp | 3242833 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638083847 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_697334 |
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| Protein GI | 110800748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTAG ATAGTTTGCT TGGAATTAAT TTTGAATTTG ATCACATTAA GCTTGGGAAA
ATAAAGATAT CTTTATCTAC TATTGATTTT CTATTAAAAA AATTTATAAC AATATGTGTC
ATAGTTATTT TTATGATTTT GGTAATTAAA ATAGGAAGCA AATTAATAGA TAAAGCTGTA
CAAAAACAAA TAGATACAAA CTTTAAGTTC TCCTTAGACA CAAGAAAGGC AAATACATTG
GGAACTTTAT TAAAAAGTAT TTTGATGTAT TCAGTATATT TTATAGGTAT AACAACTATA
TTATCTATTA TATTTGGAAA TATATCTTGG GCCTTTGCCT CTGTAGGAGG AGTAGCCGTA
GGTTTAGGAG CTCAAAGTTT TGTTAAAGAT GTAATAAATG GGATATTTAT ACTTTTTGAT
AACCAATACA ACGTTGGGGA TTATGTAACC ATAGAAGGTG TAAGTGGAAT TGTAGAGGTA
ATAGGTCTTA GGACAACTGA GCTTAGGGAT CAAGATGGTT CTCTTCATAT TATTCCAAAT
GGAATGATAA GAATAGTAAC AAATAATTGT AGAGGTGATA TGAGAGTTCA GATTGATATT
GGAATTTCAT ATAGCGATGA TATAAATAAA GTAATAAACA CTATAAACTC AGTTTGTGAT
ACATATAATA AAGAAAATAA TGATATAACA GAACCATTAA AGGTTTGGGG AGTTACAGAC
CTAACAAGTT CTAGTGTTAA TCTTAGAATT TGTGGAAAAG TAAAATCCAT GAAACTTTGG
GAAACAGAAG TAGAGTTAAG AAAGAGAATA AAAATGACTC TTGATAAAAA GAAATATATG
AAAGAAATAA TTACAGGTTA A
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| Protein sequence | MLLDSLLGIN FEFDHIKLGK IKISLSTIDF LLKKFITICV IVIFMILVIK IGSKLIDKAV
QKQIDTNFKF SLDTRKANTL GTLLKSILMY SVYFIGITTI LSIIFGNISW AFASVGGVAV
GLGAQSFVKD VINGIFILFD NQYNVGDYVT IEGVSGIVEV IGLRTTELRD QDGSLHIIPN
GMIRIVTNNC RGDMRVQIDI GISYSDDINK VINTINSVCD TYNKENNDIT EPLKVWGVTD
LTSSSVNLRI CGKVKSMKLW ETEVELRKRI KMTLDKKKYM KEIITG
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