Gene CPF_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2870 
SymboltenA 
ID4201109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp3138930 
End bp3139595 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content29% 
IMG OID638083737 
Producttranscriptional activator TenA 
Protein accessionYP_697234 
Protein GI110798986 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA CAGAAAAATT ATTAAAAGAA GCAATGCCTA TATGGGAGAA GTATTTAGAT 
CACCCATTTA TAAAGGAAAT TGGAGAAGGA ACTCTTGATA AGAATAAATT TAAAGAATAT 
TTAGTTCAGG ATTACCTTTA TTTAAAAGAG TATGCTAAAG TTTTTTGTGC TGGAGTAGTT 
AAAGCTAAAA CTATGGAAGA AATGAAATTC TTTTATAATT CAACAAAGGG AACTATGGAG 
GATGAAACAG CAGTACATAT AGAATATTTA AAAGAATTTG GTATATCAGA ATTAGATGCA 
GAGAAAAGAG AATATAAGAG TACTACTATA AGTTATACAA GCTATATGCA AGCAATAGCA 
TTAACCGGAG ATTTAGATGA GATTGCTATT GCAACTTTAC CATGTACATG GAGTTATAGC 
TACATAGGAA AATATATTTC AAAAAAATAC TCTAACAAAT TACAGGGGAA TTTCTTTAAA 
CCTTGGATTG ATGAGTATGC TTCTGATGGA TTTGATAAGT TTACAGATGA GTGGTTAGCT 
TACGTAGATA AAAAATGTTC AAACTTATCT GAAGAAAAAC AAAAAAGATT AATAGATATA 
TTTAAAAGAG CTAGTTTGTA CGAACTTGAT TTTTGGAATA TGGCTTATGA TGAAGGTGAA 
AAATAA
 
Protein sequence
MRFTEKLLKE AMPIWEKYLD HPFIKEIGEG TLDKNKFKEY LVQDYLYLKE YAKVFCAGVV 
KAKTMEEMKF FYNSTKGTME DETAVHIEYL KEFGISELDA EKREYKSTTI SYTSYMQAIA 
LTGDLDEIAI ATLPCTWSYS YIGKYISKKY SNKLQGNFFK PWIDEYASDG FDKFTDEWLA 
YVDKKCSNLS EEKQKRLIDI FKRASLYELD FWNMAYDEGE K