Gene CPF_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2850 
Symbol 
ID4200992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3115893 
End bp3117608 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content32% 
IMG OID638083717 
ProductNa+/H+ antiporter family protein 
Protein accessionYP_697214 
Protein GI110798928 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA AAACTAGATT TAAAGTTTTT CTAACGGTTT TTGCAATGAC AATGTTATGC 
TCAACCTTAG TCTTTGCTGC TGAAGATGCT GCGGCGGTAA ACTCAGCTAA GTTTGGAATG
TGGACAGTGC TGCCACCATT AGTTTCAATT GTATTAGCTT TTTTAACTAA GAATGTTGTA
GTTTCTTTAT TCATAGGAAC AATTACAGGA TGTATAATGC TTCAATTAAA TGGATTTAAT
ATAATTACAG CTTTAACTCA AGGATTTATT GATTTTACTT ATAGAGCTTT AAATTCCTTA
GCTGATCCTT GGAATGCAGG GATAATTCTT CAGGTTTTAG TTATTGGAGG AGTGATTCAT
TTAGTAGCTA AAATGGGAGG AGCAAAGGCA ATAGCTGAGG CTTTAGCAAG AAAGGCTAAG
ACTGTTAAGA GTGCACAACT TACAACTTGG CTTTTAGGGT TAGCAGTTTT CTTTGATGAT
TATGCTAATT CATTAATTGT AGGACCAATA ATGAGACCAG TTACAGATAA ATTAGGAGTT
TCAAGGGAAA AATTAGCCTT TGTTATAGAT GCAACGGCAG CTCCAATTGC AGGGTTAGCA
ATAATATCAA CTTGGATAGG CTTAGAGGTT GGATTAATTG GAGATGCCTT AAAAAGTGTA
GGAATACAAG CAGATGGTTT TGGAGTATTT TTAGAAACAA TACCATATAG ATTTTATAAT
ATATTAATTT TAGCTTTTGT TGTTATATCA GCAATAACTT TAAGAGAATT TGGACCAATG
CTTAAAGCTG AGAGAAGAGC TAGAAGAGGA GAAGTTTTAT CTACTACAGA AATTTCATCT
GATAGTGAAG ATTTAGAACC TATAGAAGGA ATTAAATTAA GTGTTTGGAA TGCAATAATT
CCAATTGGAG TTTTAATAGT ATCATCTTTA ATAGGATTTT ATTATAGTGG ATGGGTAACT
ATAATGGGTG GAGAAGATTT AGCAATAATA GAGCTTATGA ACAATACACC TTTTAGTTTT
GCTGGAATAC AAGCAGCATT CTCAAATGCA GATGCTTCAG TAGTTTTATT CCAATCAGCT
TTATTAGCAA CTATAGTAGC TCTTATATTA GGAGTAGGTA GAAAAATATT TACTATTTCA
GAAGGAATAG GAATTTGGAT TGAAGGAATG AAAGGACTTT TAATAACAGG AGTAATTCTT
ATATTAGCTT GGTCTTTAAG TTCTGTAATT AAAGAATTAG GAACTGCTTC TTATTTAGTA
GGAGTATTAT CAGATGCAAT ACCAGCATTT TTATTACCAG CAATAATATT TATTTTAGGT
TCAATAATAG CCTTTGCTAC AGGTACAGCT TATGGAACAA TGGGAATATT AATGCCACTT
GCAATTCCAT TAGCCTTTGC AATAAATCCA GAATGGAATT TTGTTATAGT AAGCACATCA
GCAGTATTAA CAGGTGCTAT CTTTGGAGAT CATTGTTCAC CTATTTCTGA TACCACAATA
CTTTCCTCAA CAGGTGCAGG ATGCGATCAT ATAGAACATG TTAGAACTCA AATATGGTAT
GCAGTATTTG TAGGAATAGT AACTGTATTA TTTGGATATA TTCCAGCTGG TTTAGGATTA
AGTATTTTCA TAGTACTACC TTTATCCTTA GTAGCTTTAT TCATATTAAC AATGATATTT
GGTAAAAAAG TAGATGACAA AGTAGTTAGC AATTAA
 
Protein sequence
MGNKTRFKVF LTVFAMTMLC STLVFAAEDA AAVNSAKFGM WTVLPPLVSI VLAFLTKNVV 
VSLFIGTITG CIMLQLNGFN IITALTQGFI DFTYRALNSL ADPWNAGIIL QVLVIGGVIH
LVAKMGGAKA IAEALARKAK TVKSAQLTTW LLGLAVFFDD YANSLIVGPI MRPVTDKLGV
SREKLAFVID ATAAPIAGLA IISTWIGLEV GLIGDALKSV GIQADGFGVF LETIPYRFYN
ILILAFVVIS AITLREFGPM LKAERRARRG EVLSTTEISS DSEDLEPIEG IKLSVWNAII
PIGVLIVSSL IGFYYSGWVT IMGGEDLAII ELMNNTPFSF AGIQAAFSNA DASVVLFQSA
LLATIVALIL GVGRKIFTIS EGIGIWIEGM KGLLITGVIL ILAWSLSSVI KELGTASYLV
GVLSDAIPAF LLPAIIFILG SIIAFATGTA YGTMGILMPL AIPLAFAINP EWNFVIVSTS
AVLTGAIFGD HCSPISDTTI LSSTGAGCDH IEHVRTQIWY AVFVGIVTVL FGYIPAGLGL
SIFIVLPLSL VALFILTMIF GKKVDDKVVS N