| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2786 |
|---|
| Symbol | ftsH |
|---|
| ID | 4203350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 3049622 |
|---|
| End bp | 3051427 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638083654 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_697158 |
|---|
| Protein GI | 110800961 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TACAAAGTAT GATTACTTAT ATAGCTATTT TTGCTGTAGT GCTTATGTTT
GCATTTGCTT TTTATAGAAA TGGAACTCAA GGAAAAGTAA TATCATATAC TGAATTTAAA
GAAGCATATG TAGAAAATAA AATTGAAACA ATGACCATAA AAGAAGATAA AATGTCAGTT
GATGGGGTTT TTAAAGATGG TAAGAGGTTT ACTTCATATG TTTCAAATAA GATGTTAGAC
AATCTTTTAC AAGAGACTCA AGGGGTAGAA ACTGTAATAA AGTATACTCC GCCTAATAAT
GTGGGTATTT GGATTAGTTT CCTTCCAACA ATACTTATAA TAGGTGTGAT ATTCTTTGGT
TTATTTATGT TCACACAGCA AGCTCAAAAC AGTGGTGGAA ATAGAGGGGT AATGAATTTC
GGTAAAAGTA AAGCTAAGAT GGCTAATTTA GACGGAAAGA AAGTTACGTT CAAAGATGTC
GCTGGAGCTG ATGAAGAAAA AGGTGAATTA GAAGAAATTG TTGATTTCTT AAAACAACCT
AAGAGATATA TAGAAATGGG AGCAAGAATA CCTAAAGGAG TTCTTTTAGT AGGGCCTCCA
GGAACAGGTA AGACACTTCT TGCAAAAGCT ATAGCAGGAG AAGCTGGTGT TCCTTTCTTT
AGTATATCAG GTTCAGATTT CGTTGAAATG TTTGTTGGAG TTGGTGCTTC AAGAGTAAGA
GATTTATTTG AGCAAGCTAA GAAAAATGCT CCATGTATTA TATTCATAGA CGAAATCGAT
GCTGTTGGTA GACAAAGAGG TGCTGGACTT GGTGGCGGTC ATGATGAAAG AGAACAAACA
TTAAACCAAT TACTAGTTGA GATGGACGGT TTTGGAGTTA ATGAAGGAAT AATTATGATA
GCTGCTACAA ATAGACCAGA TATATTAGAT CCAGCATTAT TAAGACCAGG AAGATTTGAT
AGAAGAATTT TAGTAGGTGC ACCTGATGTT AAGGGTAGAG AAGAAGTACT AAAAGTTCAT
ACAAGAAATA AACATCTATC AGAAGATGTA GATTTAAAAG TTTTAGCTAA AATGACACCA
GGATTTAGTG GTGCAGATCT TGAAAACTTA ACTAACGAAG CTGCATTATT AGCAGTTAGA
GGTGGCAAAA GTAGCATAGA TATGGCAGAC ATTGAAGAGG CTATAACAAG AGTGATAGCT
GGGCCAGAGA AGAAGAGTAG AGTTGTTAGT GAATATGATA GAAGAATCAC TGCAGTTCAC
GAATCTGGTC ACGCTGTTGT AAGTAATGTT CTAGAGTATG CAGATCCAGT TCATGAAATA
AGTATAATTC AAAGAGGAAT GGCTGCAGGA TACACAATGA ATTTACCAGA GGAAGATAGA
ACTCACACAT CTAAGAAACA ACTTAAGGAT AAGATGGTTG AACTTTTAGG TGGAAGAGTG
GCTGAGAAAT TAGTTATTGG AGATATAAGT GCCGGTGCTA AAAATGATAT AGATAGAGCT
AGTCACATTG CTAGAAGTAT GGTTATGGAA TATGGAATGA GTGATGTTAT TGGACCTATA
TCATTTGGTA ATAGCGATGG TGGCGAAGTA TTCTTAGGTA GAGACATTGG AAAGAGTAGT
AACATAAGTG AAGAAACTAG CGCTAAAATA GATGAAGAAA TCAAGAAATT AATTGATGAA
GCTTATAATA GAGCAGAATC TATATTAAGA GAAAATATAA GTAAATTAAA TGCAGTAACT
GATGTGTTAC TTCAAAAAGA AAAAATTGAT GGTGATGAGT TTAGAGAAAT ATTTAAAAAC
TCATAG
|
|---|
| Protein sequence | MKKLQSMITY IAIFAVVLMF AFAFYRNGTQ GKVISYTEFK EAYVENKIET MTIKEDKMSV
DGVFKDGKRF TSYVSNKMLD NLLQETQGVE TVIKYTPPNN VGIWISFLPT ILIIGVIFFG
LFMFTQQAQN SGGNRGVMNF GKSKAKMANL DGKKVTFKDV AGADEEKGEL EEIVDFLKQP
KRYIEMGARI PKGVLLVGPP GTGKTLLAKA IAGEAGVPFF SISGSDFVEM FVGVGASRVR
DLFEQAKKNA PCIIFIDEID AVGRQRGAGL GGGHDEREQT LNQLLVEMDG FGVNEGIIMI
AATNRPDILD PALLRPGRFD RRILVGAPDV KGREEVLKVH TRNKHLSEDV DLKVLAKMTP
GFSGADLENL TNEAALLAVR GGKSSIDMAD IEEAITRVIA GPEKKSRVVS EYDRRITAVH
ESGHAVVSNV LEYADPVHEI SIIQRGMAAG YTMNLPEEDR THTSKKQLKD KMVELLGGRV
AEKLVIGDIS AGAKNDIDRA SHIARSMVME YGMSDVIGPI SFGNSDGGEV FLGRDIGKSS
NISEETSAKI DEEIKKLIDE AYNRAESILR ENISKLNAVT DVLLQKEKID GDEFREIFKN
S
|
|---|
| |