Gene CPF_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2714 
SymbolrplC 
ID4202163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2974247 
End bp2974876 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content37% 
IMG OID638083580 
Product50S ribosomal protein L3 
Protein accessionYP_697094 
Protein GI110800321 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000231855 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CTATAATAGG TAAAAAAGTT GGAATGACTC AAATATTCGA TGAGAATGGT 
AGAGTAATCC CTGTAACTGT AGTTGAAGCT GGTCCATGTG TTGTAGTTCA AAAGAAAACA
GTTGAAACTG ATGGATATGA CGCAATACAA GTTGGATTCG GTGAATTAAG AGAAAAATTA
GTTAACAAAC CAAGAAAAGG ACATTTCGCT AAAGCAGGTG TTTCTTTAAG AAGAACTTTA
AAAGAGTTCA GAATGGAAGA TGTTGCTAAT TACAATGTTG GAGACGAAAT AAAGGTTGAC
ACATTTGAAA TTGGAGACAA AGTAGACGTA TCAGGAGTTT CTAAAGGTAA GGGATTCCAA
GGTACAATCA AAAGATGGAA TGCTAGTAGA GGACCAATGT CTCACGGTTC TAAATTCCAC
AGAGCACCAG GTTCAATGGG AGCTGCTTCA GACCCATCAA GAACTTTCAA GAACAAAAGA
ATGCCTGGAC ATATGGGAGC TAAGAACACA ACTGTTCTTA ACTTAGAAGT TGTTAAGATA
ATGCCTGAAA AGAACATCAT CTTAATCAAG GGTGGAATCC CAGGTCCAAA TAAAGGCACA
GTAGTTATAA GAAACAGCGT TAAGGCTTAA
 
Protein sequence
MKKAIIGKKV GMTQIFDENG RVIPVTVVEA GPCVVVQKKT VETDGYDAIQ VGFGELREKL 
VNKPRKGHFA KAGVSLRRTL KEFRMEDVAN YNVGDEIKVD TFEIGDKVDV SGVSKGKGFQ
GTIKRWNASR GPMSHGSKFH RAPGSMGAAS DPSRTFKNKR MPGHMGAKNT TVLNLEVVKI
MPEKNIILIK GGIPGPNKGT VVIRNSVKA