Gene CPF_2662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2662 
Symbol 
ID4201319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp2935176 
End bp2935778 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content32% 
IMG OID638083528 
Productputative spore-cortex-lytic enzyme 
Protein accessionYP_697042 
Protein GI110798713 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA GTATTTATAA TTACTTTATC TTCACCTTCG CCTTATTAAT TATCACTACA 
CTTAATGAGA AAGAAGTTTT AGGGCTTTCT CTATCAAATG AGCATGTAAC CAAAAATAAT 
TATATAGAAT TAACAGAAAT GGCTTCTAAT TCGCCAAATC CTGAAGCAGA ACAAAGTAGT 
AATTCAAATA ATGAAGTTGT TGCTGTATTC CAAAGTTCAA ACTCTACAAT TTCACTTACT 
AAAGATGACA TATATTTAAT GTCTCAAGTA GTTTATGCTG AAAGTAAAGG TGAACCTTTT 
GATGGAAAAA TAGCCGTTGC ATCAGTAATA CTTAATAGAA CAACGGATTC TCAATTTCCA 
GATACAATTC ATGGAGTAAT AACACAGAAA AATGCCTTTT CTTGTGTTAG AAATGGCAAA 
ATTGACGTAG TACCTGATGG TGATAGCTAT AATGCCGTTC TAAAAGCCAT AGAAGGATAT 
GACCCAACAA ATGAGGCATT ATATTTTTAT AACCCTAAAA TCGCTACATG CTCGTGGATG 
AAAGGCGTCG AAAAGACAGG AGAAAAAAGT ATAGGTCAAC ATGTATTTTT TAATGTTACC 
TAA
 
Protein sequence
MKKSIYNYFI FTFALLIITT LNEKEVLGLS LSNEHVTKNN YIELTEMASN SPNPEAEQSS 
NSNNEVVAVF QSSNSTISLT KDDIYLMSQV VYAESKGEPF DGKIAVASVI LNRTTDSQFP 
DTIHGVITQK NAFSCVRNGK IDVVPDGDSY NAVLKAIEGY DPTNEALYFY NPKIATCSWM 
KGVEKTGEKS IGQHVFFNVT