Gene CPF_2547 details

Gene Information

• Locus tag: CPF_2547
• ID: 4203127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2806061
• End bp: 2808121
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 638083414
• Product: triple tyrosine motif-containing protein
• Protein accession: YP_696937
• Protein GI: 110801206

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGAAT TACTTTTAGA GTTAGATACG AGAGATATAA TAGAACATAA TAGTCCGGTT 
AACATAAAAA TAATAAATAA CACTAATGAC AATTTAAGAT ATAAAATCTT AATAGGAAAG 
GATGGAATTT GGGAAACTTT AAGGGAATTT GAAAAAGGAA ATGAATTTAT CTGGAATCCT 
AAAGAAGATG GAGAGTATAT GATTATGGTT CAAGGAAGAA AAGAGGATTC AAATAAGCCT 
TTTGATTACA AAGTTACTGA GGGAGTTAAT GTGAAAAGAA CAGTTCATGG CCTTCAAGAT 
GAAATGAATA AAGATGAAAT AAATAAAGAT GAAATTAAAG AAGAAAAATT AATAAAAGGA 
ATCTATCTAA ATAAAGATGT ATTTAATGTT GGAGAGAAGG CAGAGTTAAA GGTTGATAGT 
AACAATGAAA ATATTATGTA TAGATATTTT ATAAGTGGAA AGAACGGATG GCAACTTATA 
AAGGATTATA CATTAGAAAA TAAATTAAAT TATACTATTA ATGAAAGTGG TCAATTCGAG 
TTTTTAATTG AATGTAAAAA AACAAGTTCA ACTAATACAA CAGATGATTA TGCCACAGTT 
ATATTTACAT CAAAAGAATT TGTAAAGCCT GAAATAATTA ATTTTATTAA TTTAAGTGAA 
AAATTAATAG TAAATTCAGA GCTTACCTTT GAAGTGGAAG CAAATTTTGA AGATGAAAGA 
ACAGCACTAT ATAAGTTTGT AAAAATTTCA CCTGATGGAA GTAGAACTTG CATTCAAGAT 
TTTTCATCAA GCCGTATAGT AACTTTTAAA GAATTTAAAG AGGGAAGATA TAAGCTTTTA 
TGTTTAATAA GAGATATGTA TTCTAATAAG GAATTTGATG ATAGAGCCGT TATGGTATAT 
GATATAAAAC CATATGAACC ATTACAATTA AGAAGTTTTA CTACAGATTT AAGCTCACCT 
CAAGAAAAAG GAGAGGTAAT AGAGATAAAA GCTGTTATTG ATGGAGGAAG TGATATCCTC 
TATAGATTTA AAATAGATGG AGAAATATCT GAGGATACGG GTTATACAAG AAATAGTACT 
TTAAAATGGA ATGCTAAAAA AGAAGGAAAT TATAGAATAA CTCTTTGGGC TAAGGATGAA 
TCCTTTATTG GAGATTATGA AATAGAATCT AAATTAGATT ATAAAATAGA AAAAAAGGTG 
AAAAAGCCAA TAAAAATAAC AGAATTAATA TTTGATAGAG ATAAGACCCC TTTAATAAAT 
GAAGTAATAA AACTTAGGGT TAGTGCAGAG GGTGGTACTG ACTTAAAATA TTCCTTCTTA 
ATAATTAAGG ATGGTAAAAC CATAGAAAGT ATTGATTTTG GAAGTAATAA TTGGGTAGAA 
TTTATTCCAA ATGAAAAAGG AAATTATCAG CTTGATGTAA GAGTAAAAGA TAAGTATTCA 
ACAAAGGAAT ATGATGTGCA TACTGTTTTA AATTTTAAAG TTAGGGAGTA TGCAGAAGGG 
AAGATTGATC ATATATTAGT TCCAGCAAAG GAATATTTTT TAGTTGGAGA TGATATTGAT 
ATTGAAGTAA TAGTTCAAAA TACTAGACAA GTAAAGGTTA AGTATGTTAC TAAGGTAAAT 
GGACAAGTAG TAGAGGAAAC TGATTATGTA AAAAATAAGA GGTTTAAAGT TACTCCAAAA 
TGTCCAGGAA AATACACAAT TGATATATTT GCTAGAAATA TTAAATGTAA AGAGGGATTT 
GATTCAAGAA GAGAAGTAAG ATTTTATGTT AGTGAAGCCT TACCTATTAC AGGCACTAAA 
ATAAGTACTT CTGATAAAGT CTTTAAAATT AATGAAGAGA TAAACTTTTC TACAAAATGT 
GAAGGTGGAA GTAGAGTTTG CTATGAATAT TATATAATGG TTAACGGAAA TTGGTCTTTA 
GTTCAAAAAT ATAGTAGAAA GAGTTATTAT TCTTTTAGAC CATATGTACC AGGAAAGTAT 
AAAGTTTTAG TATTAACTAA AAGTTATTAT AAAAAATGTG CTTATGAGGA CTATGATACT 
TTTGAATTTA AGGTAGAATA A 

 

Protein sequence

MGELLLELDT RDIIEHNSPV NIKIINNTND NLRYKILIGK DGIWETLREF EKGNEFIWNP 
KEDGEYMIMV QGRKEDSNKP FDYKVTEGVN VKRTVHGLQD EMNKDEINKD EIKEEKLIKG 
IYLNKDVFNV GEKAELKVDS NNENIMYRYF ISGKNGWQLI KDYTLENKLN YTINESGQFE 
FLIECKKTSS TNTTDDYATV IFTSKEFVKP EIINFINLSE KLIVNSELTF EVEANFEDER 
TALYKFVKIS PDGSRTCIQD FSSSRIVTFK EFKEGRYKLL CLIRDMYSNK EFDDRAVMVY 
DIKPYEPLQL RSFTTDLSSP QEKGEVIEIK AVIDGGSDIL YRFKIDGEIS EDTGYTRNST 
LKWNAKKEGN YRITLWAKDE SFIGDYEIES KLDYKIEKKV KKPIKITELI FDRDKTPLIN 
EVIKLRVSAE GGTDLKYSFL IIKDGKTIES IDFGSNNWVE FIPNEKGNYQ LDVRVKDKYS 
TKEYDVHTVL NFKVREYAEG KIDHILVPAK EYFLVGDDID IEVIVQNTRQ VKVKYVTKVN 
GQVVEETDYV KNKRFKVTPK CPGKYTIDIF ARNIKCKEGF DSRREVRFYV SEALPITGTK 
ISTSDKVFKI NEEINFSTKC EGGSRVCYEY YIMVNGNWSL VQKYSRKSYY SFRPYVPGKY 
KVLVLTKSYY KKCAYEDYDT FEFKVE