Gene CPF_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2503 
Symbol 
ID4203033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2775782 
End bp2777197 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content27% 
IMG OID638083368 
Productsensor histidine kinase 
Protein accessionYP_696917 
Protein GI110801437 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGTA TAAAGACTAG GCTAATGAAA AACTTTTTAG TTCTTTTATT ATCAACTATT 
ATTATAGTTT CAGCCATGTT TTTGATTTTT ATTTCTAGAT ATTATTATCA AAATACAGAG
GAAATATTAT TAAGTCAAAT TAATATATCT GTAGATTTTT ATAAAAGATA TTTATCAAAT
GTTAGTCTAG AAGAAAATGT TTATGAAGAT GTAGATATAT TTTGGAAGCA AACAGATGCT
CAAGTTCAAA TTTATAACTT AAAAGGGCAG TTAATAATGG ATTCTATAGG GTTAGAGCCT
AAAGAGTATA ATACTCCTGT AGATGTAAAA AGAGCCTTAG AAGGAGATAC AGCAAAGTGG
GTTGGAACAG TGCCTGATTA TACTGGTAAA GTAATGGCCA TTTCAGCACC ACTTAGAAAT
TCTTCAAATG AAATTGTAGG AGTTATTAGA TATATAAGTT CACTTAGAAA TGTGGATAAT
TTTATATTAA ATTTCTTTTT AGTATTTTTA GTAATAGGAT TAACAGTTTT AGCTATTGGT
ATAATCTTAA GTTACTTCTT AGCTAATAGT ATAGTAAATC CAATTACAGA ATTAATAAAA
GTTTCTGAAC AAATGGCTAA GGGAAATTTA AAAGTAAGAA ATAAGATTGT TACTAATGAT
GAAATTGAAA AGTTAGCTGA TAGTCTTAAT ATAATGGCAG AGGAAATTGA AAATAGGGAA
ATATTAAAAA ATGAATTTAT TTCTTCAGTT TCTCATGAAC TTAGAACACC ATTAACATCA
ATAAAAGGTT GGGCAATAAC TTTAAATAAT GATTTTACAG ATAGAGAAAC CTTAAAGATG
GGCTTTGACA TAATTGAAAA AGAAGCTGAT AGATTAAGTA ATATGGTAGA GGAGCTATTA
GACTTTTCAA AGTTTGTTAG CGGAAAAATA AAATTGAAAT ATGAAGAAAT AAACCTAAAA
GAATTTATAG AGTACTTAAG GTTATATATG AATCCTAGGG CAGAAAGAGA ACATAAAGAA
CTTATACTAA AAGGGATTAC AGAGGACTTT ATAATTGTAG GAGATAAGGA CCGATTAAAG
CAAGTATTTA TAAATATAAT AGATAATGCT TTTAAATTCA CTCATGAAAA TGAAAAGATA
ACAATAGAGT TTGTATATGC TGATGAAGGA ATCTATATAA ACATAATTGA TACTGGATGT
GGAATAAGTA AAGAAGAGTT GCCTAGAGTA AAAGAGAAAT TTTACAAGGG TAAAAATTCA
AAGTCACAAA ATGGAATAGG ATTATCAATA TGTGATGAAA TTATAGCTTT GCATGAAGGG
ACTTTGGAGA TTTATAGTGA ATTAGGTAAG GGAACGAAAG TGGTTATATA TTTACCTAAG
AAATTAATCA GGAGTGTTGA GGATGATTTA AATTAA
 
Protein sequence
MKSIKTRLMK NFLVLLLSTI IIVSAMFLIF ISRYYYQNTE EILLSQINIS VDFYKRYLSN 
VSLEENVYED VDIFWKQTDA QVQIYNLKGQ LIMDSIGLEP KEYNTPVDVK RALEGDTAKW
VGTVPDYTGK VMAISAPLRN SSNEIVGVIR YISSLRNVDN FILNFFLVFL VIGLTVLAIG
IILSYFLANS IVNPITELIK VSEQMAKGNL KVRNKIVTND EIEKLADSLN IMAEEIENRE
ILKNEFISSV SHELRTPLTS IKGWAITLNN DFTDRETLKM GFDIIEKEAD RLSNMVEELL
DFSKFVSGKI KLKYEEINLK EFIEYLRLYM NPRAEREHKE LILKGITEDF IIVGDKDRLK
QVFINIIDNA FKFTHENEKI TIEFVYADEG IYINIIDTGC GISKEELPRV KEKFYKGKNS
KSQNGIGLSI CDEIIALHEG TLEIYSELGK GTKVVIYLPK KLIRSVEDDL N