Gene CPF_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2487 
Symbol 
ID4202164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2759350 
End bp2760495 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content29% 
IMG OID638083352 
Productputative mannosyltransferase 
Protein accessionYP_696901 
Protein GI110800322 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0329082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAACT TAATAGATGC AAGAGGTGCA ACTTGGTATA GAGGGACAGG TATAGGAACA 
TACACATATA ACCTATTAAC AAACATATTA AAATTAGATA AGGATTCATC TTATGATTTA
TTATGCTCTG GAGAAAAAAT ACCTGAGTTT GAAACTGAAA ATACTAAAAT AATAATGTCT
TCTAGAAAAC ATCAACGTTT TTTTGAAGAT TACTATATAC CATCCTATGG AATAAAAGAA
AATATAGATT TACTTCACCT TCCTCAAAAT GGACTTGGAC TTTCCTCTGA AGGAAACTTT
GCAAAATTGG TTACTATTCA TGACTTAATT CCTTACATTT TACCTGAAAC CGTTGGTAAA
GGTTACTTAA AAAAATTTCT TCAAAGTATG CCTGAAATAA TTGATAATTC AACAGGAATA
ATCACTGTAT CAGAATACTC TAAAAGTGAT ATTCTAAGAT TTTTCCCACA CTTTCCTGCT
GAAAATATTT TTGTAACTCC ACTGGCAGCT AATGAAAATT ATAAACCTTT AGATAAGGAA
AAATGCCTAT TTGATGTTAA TAAGAGATTT GATTTTAATG GACCATTTAT TATGTATATA
GGTGGCTTTA GCTTAAGAAA GAATGTTAAG GGACTAGTTG ATGCCTTTAA CAGTATTCAT
AAAAATATTG ATGAAAATTA TAAACTTTTA ATTGTAGGCG GATTAAGAGA CGAGGGATTA
AAATTAAAGG CCTATACTGA AAGTTTACCT ATAAAAGATA AGGTTATTTT CACTGGATTT
ATAGAGGATG AATATTTACC AACCTTATAT AACGCAACTA CCCTCTTTGT TTATCCTTCT
CTATATGAGG GTTTTGGTTT ACCTCCTTTA GAAGCTATGA GTTGTAAGAC TGCAGTTTTA
ACCTCAAATA TAACTTCTAT TCCTGAAGTA GTTCCATTTA AAGAAAGCTT AGTTAATCCA
AATAACCCCA AGGAATTATC TTCAAAACTA GAAAATCTAT TAAATGATTC AAAACTTAGA
AATAATTTAG AAGATATATG TTTTGAAAGA AGCAAAGAAT TTACTTGGAA AAAAACAGCA
AAGAAAACCT TAGAGGTATA TAAAAAGGTA GTAGAAATCT CTAAAAACTC ATTAATAAAA
GCATAA
 
Protein sequence
MYNLIDARGA TWYRGTGIGT YTYNLLTNIL KLDKDSSYDL LCSGEKIPEF ETENTKIIMS 
SRKHQRFFED YYIPSYGIKE NIDLLHLPQN GLGLSSEGNF AKLVTIHDLI PYILPETVGK
GYLKKFLQSM PEIIDNSTGI ITVSEYSKSD ILRFFPHFPA ENIFVTPLAA NENYKPLDKE
KCLFDVNKRF DFNGPFIMYI GGFSLRKNVK GLVDAFNSIH KNIDENYKLL IVGGLRDEGL
KLKAYTESLP IKDKVIFTGF IEDEYLPTLY NATTLFVYPS LYEGFGLPPL EAMSCKTAVL
TSNITSIPEV VPFKESLVNP NNPKELSSKL ENLLNDSKLR NNLEDICFER SKEFTWKKTA
KKTLEVYKKV VEISKNSLIK A