Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2378 |
Symbol | |
ID | 4203032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2649352 |
End bp | 2650665 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638083243 |
Product | cell envelope-related function transcriptional attenuator |
Protein accession | YP_696801 |
Protein GI | 110801436 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0983623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAATG AAGAAAATAG ATTTGAAAAA AGACAAGATA AGAAAAATAT CAATAAAAAA AGCTTGGTAA AAAGAATAAT TTTAGGTGCT TTAGCTTTTA TTCTTATTTT TTTTATAAGT ATTTTTGGAT ATTTTTATTT TAAATATGGC AGTTTTTTAG GGGAAGTTTT TAATATAGTT AAAGACGTAA AACAGGATGT AATAAAGGTT GAAGAGCCAA TTAATGTACT CTTATTAGGA ATGGATATTG GTGATACAAG TGATGTATCA AATAAAGATG CTAAAAGAAC AGATACCATA ATTCTAGCAA ACTTTGATCC TATAACAAAA GAGGCTAAGT TAATATCTAT ACCTAGAGAT ACTAGAGTAA AAATTGGAGG AAAGTCTCAA AAAATAAATG CTGCTTACCC AATTGGGGGA GAAAAGCTTG TTAAACAGCT TGTTGGAAAT ATATTAGGGG TTAAGGTTGA TTATGTTGTT AAAGTTGATT ATGAAGGCTT TAGAGGCATA ATAGATGCCA TTGGTGGAAT TGATATGTAT ATAGAGCAGG ATATGAACTA TGACGATCCA GGGCAGGATT TACACATACA TTTCAACAAG GGAGAAACTG TACACCTAGA TGGTAAAAAA GCTGAAGAGT TTTTTAGATG GAGAAAAAAT AATGATGGTA CAGGATTAGT AAATGGAGAT GTTGATAGAA TAAAAAATCA ACAAAAGTTT ATAAATGCTG TAATAGATAA GGTTTTATCA GTATCTACCA TAACAAAGAT AGATAGTATA GCAGAGATTT TAAATAAAAA TATAGAAACT AATATTCCTT TAGATGTTAC TGTTGCATAT GGACTTAAAG GATTAGAGAC TGATAAGAAT AATATAAAAA TGATGACTTT ACCTGGAGAA GGTAAATATG TTGGAAATGT TTCTTATTAT ATTCCTGATG AAAAGGCTAC TAAAGAATTA AGAAGTCAAT TAAACAGTAG TAATTTAAGT GGAAGAAAAA ATGTTATTCC TAGTGCTGCT AGAGGAGATT TATCCATAAA AGTTTTAAAT TGCACAAAAA TAAATGGCTT AGCTGCAAAT GTACAAAAAC AATTAAATGA AAACGGATAT GATAAAGTTG ATGTTGGAAA TGGAGATCCA AGAGAAAAAT CAGAGATTTT GATAAAGGAT GAAAGTTCTA GAGCTTTTAT GGAAAATGAT TTAAAGATAG AGAATATTAA AAAGGGCATT TCATCTAAGT ATGATGGAAA TGGAACTTAT GATGTAGTAA TATTACTAGG AAAAGACTTT AAAAATTTCG GAGAGATGAA ATGA
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Protein sequence | MGNEENRFEK RQDKKNINKK SLVKRIILGA LAFILIFFIS IFGYFYFKYG SFLGEVFNIV KDVKQDVIKV EEPINVLLLG MDIGDTSDVS NKDAKRTDTI ILANFDPITK EAKLISIPRD TRVKIGGKSQ KINAAYPIGG EKLVKQLVGN ILGVKVDYVV KVDYEGFRGI IDAIGGIDMY IEQDMNYDDP GQDLHIHFNK GETVHLDGKK AEEFFRWRKN NDGTGLVNGD VDRIKNQQKF INAVIDKVLS VSTITKIDSI AEILNKNIET NIPLDVTVAY GLKGLETDKN NIKMMTLPGE GKYVGNVSYY IPDEKATKEL RSQLNSSNLS GRKNVIPSAA RGDLSIKVLN CTKINGLAAN VQKQLNENGY DKVDVGNGDP REKSEILIKD ESSRAFMEND LKIENIKKGI SSKYDGNGTY DVVILLGKDF KNFGEMK
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