| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2377 |
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| Symbol | |
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| ID | 4202892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2648459 |
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| End bp | 2649355 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083242 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_696800 |
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| Protein GI | 110800540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTT TAGAAAGTAA AATAACTAAA GAGTATGATA AAAGAAAAAT AAGAGAGTTT
TTAAAAGAAG AGTTAGGATT ATCTTCAAGA TTAATAAGAA GTGCAGCCAT AGACAAGAGA
ATTAAGGTAG ATGGTGTTGC TGTAAAGATG AACTATGTTG TTAAAACTGG TGAAGAGATA
AAAATCGAGC TTTCAAAAAA GGAATCTCAA AATATTGAAC CAGAAAAAAT GGATATAGAA
ATAGTTTATG AGGATAGTGA CATATTAGTT TTAAATAAGA AACCTTTTAT GGTTGTACAT
CCTACAAGAA GCCATCCTAA TGGAACCTTA GCTAATGGTA TATTATATTA CTTTAAAGAG
AGTAATCAAG ATTGTATAGT TAGACTAGTT AGTAGATTAG ATATGAATAC TTCAGGACTT
ATAATCATAG GTAAAAATCA ATATGCTCAT ATGGTTTTAT CTAATGAAAT GAAAACTGAT
AAATTTCAAA AAAGATATTT AGCTATAGTT CATGGAAATT TAGAAGAAAA AGAAGGAACT
ATCAATAGAC CAATTTATAG ACCAGCAGAG GATACTATAA AAAGGGTTGT AGATGAAAGA
GGGCAAGAGA GCATAACTCA CTACAAGGTT ATAGAAAGTT ATAAGGGTGC TGATTTAGTT
GAATGTTTAC TAGAAACAGG AAGAACACAT CAGATAAGAG TGCATCTAAG CAGTTTAGGT
CATCCTATAT TTGGAGATTC TTTATATGGA ACAGAGGATG AAGAGTTTAT ATCAAGACAG
GCACTGCATG CTTATGGATT AGATTTTTAT AGTCCAAAGA CAAAGAAGCC TTTAAGCTTA
AGGGCAGATC TTCCAGAGGA TATGAAAGAG TTAATAAATA AATTAAAAAA CAAGTAG
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| Protein sequence | MSILESKITK EYDKRKIREF LKEELGLSSR LIRSAAIDKR IKVDGVAVKM NYVVKTGEEI
KIELSKKESQ NIEPEKMDIE IVYEDSDILV LNKKPFMVVH PTRSHPNGTL ANGILYYFKE
SNQDCIVRLV SRLDMNTSGL IIIGKNQYAH MVLSNEMKTD KFQKRYLAIV HGNLEEKEGT
INRPIYRPAE DTIKRVVDER GQESITHYKV IESYKGADLV ECLLETGRTH QIRVHLSSLG
HPIFGDSLYG TEDEEFISRQ ALHAYGLDFY SPKTKKPLSL RADLPEDMKE LINKLKNK
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