Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2326 |
Symbol | |
ID | 4202466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2582636 |
End bp | 2584582 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638083191 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_696749 |
Protein GI | 110800719 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0942219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATA AAAATAACAA TTATGATGTT ACCTCTTTAA CTTCTTTAGA AAAGTTAGAA CCAGTAAGAG TAAGACCAGG AATGTACATA GGTTCTACAG GAAGCAAGGG ACTTCATCAT TGTATATGGG AAATATTAGA TAACTCTATA GACGAAATAT CAAATGGATA TGGAAATAAG GCTAAGGTTA TTTTAAATAA AGATAAAAGT GTAACTGTAA TAGATAATGG AAGAGGAATT CCTACGGGAA TGCATCCAAT AAAGAAAAAA ACTGGTGTTG AAATGGTATT TACAGAGCTT CACACTGGTG GTAAGTTTAA TAACCAAAAC TATAAGACTT CTGGAGGACT TCATGGTGTT GGAGCAGCCG TTGTTAATGC CTTATCAAGA TGGCTAGAAG TTGAAGTAAA ACAAAATGGA AAAATATATA GACAAAGATT TGAATATGCT TATGACAAAG AGCTTAAAAA AGATATGCCA GGAACACCAG TAACTCCATT AGAAGTAGTA GGAGAATCTA AGGAAACTGG AACAAAGGTT ACTTTTTTAC CAGATAGAGA AGTATTTTCA ACATCAGATT TTAAATTTGA CATAATAGAT GAAAGATTAC AAGAATTAGC TTTCCAAAAT AAAGGAATAA GATTAGAACT TATTGATAAT AGAAAAGAAG AAAGCGTAAG TAAAGAATAT TACTCTGAAA GAGGACTTTT AGACTTTATA GATTATTTAA ATGAAAGTAA AACCCCTCTG CATCCAACTC CTGTTTTATT TGAAGGAGAA AAAGAAGTAA ATAACATACA AATGTATGGA GAGATATGTC TTCAATTTAC TGATTCAACA ACAGAGAATA TAGTTAGTTA CGTAAATAAT ATTCCTACTA CAGAAGCTGG TACTCATGAG ACTGGTTTTA AAACAGGAAT GACTCGTGCT TTTAAAGAAT GGGCTAAAAA GCTTAACCTT ATAAAAGAAA AAGATAAGGA ATTTGAAGGT GATGATTTAA GAGAAGGTAT GACAGCTATT GTCAGAATAA AAATCACAAA TCCAGTCTTT GAAGGTCAAA CAAAAACTAA GCTTGGAAAT AATGAAGCTT ACACAATGAT GAATGATTTA GCTTACACTA AGTTTGGTCA TTGGATAGAG GATAATAAAG AAGTTGCAAC TATGATTATA AATAATGCCT TAGATGCAGC TGCTAGAAGA GAAAAAATTA AAAAGATTAA TGATGCAGAG AGAAAGAAAA TAGGAAAAGG AACAGCACCT TTAGCAGGAA AGGTTGCAGT ATGCACATTA AAAAATAAAG AAGCTAATGA ATTCATAGTA GTTGAGGGAG ATTCAGCAGG TGGATCAGCT AAGCAAGCTA GAGATAGAAG ATTCCAAACA ATAATGCCTT CAAAAGGTAA AATAATGAAT ACAGAAAAAC AAAAGTTAGA AAATGTTATA GCTTCTGAGG AATTAAAAAT CTTTAACACT GCCATAGGTA CAGGAATTTT AGATAATTAT AATGAAGAAG ATTTAAAATA TGACAAAATA ATAATAATGA GTGATGCTGA CGTAGATGGA TATCATATAA GAACTCTTTG GATGACATAT ATCTATAGAT ACATGAGACC TCTTATAGCT AATGGTCATC TTTATTTAGC ACAACCACCT CTTTATAAAG TTGCTAAATC AGGTAAGGGT AAAGATAAGA TTCTTTATGC TTATAGTGAT GACGAATTAG AAGAAGTTAA AAAGAAGGTA GGAAAGGGAG CAACTATTCA AAGATTTAAA GGACTTGGAG AAATGAATCC AGACCAATTA TGGGAGACAA CTTTAAATCC AGAAACAAGA ACTTTAGTAC AAGTTACTAT AGAAGATGCC GCTAAGGCTG AAAAAATGGT TTCTTTATTA ATGGGTGATG TTGTTCAGCC TAGAAAGAAC TATATGTATA AGTATGCTGA GTTCTAA
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Protein sequence | MSNKNNNYDV TSLTSLEKLE PVRVRPGMYI GSTGSKGLHH CIWEILDNSI DEISNGYGNK AKVILNKDKS VTVIDNGRGI PTGMHPIKKK TGVEMVFTEL HTGGKFNNQN YKTSGGLHGV GAAVVNALSR WLEVEVKQNG KIYRQRFEYA YDKELKKDMP GTPVTPLEVV GESKETGTKV TFLPDREVFS TSDFKFDIID ERLQELAFQN KGIRLELIDN RKEESVSKEY YSERGLLDFI DYLNESKTPL HPTPVLFEGE KEVNNIQMYG EICLQFTDST TENIVSYVNN IPTTEAGTHE TGFKTGMTRA FKEWAKKLNL IKEKDKEFEG DDLREGMTAI VRIKITNPVF EGQTKTKLGN NEAYTMMNDL AYTKFGHWIE DNKEVATMII NNALDAAARR EKIKKINDAE RKKIGKGTAP LAGKVAVCTL KNKEANEFIV VEGDSAGGSA KQARDRRFQT IMPSKGKIMN TEKQKLENVI ASEELKIFNT AIGTGILDNY NEEDLKYDKI IIMSDADVDG YHIRTLWMTY IYRYMRPLIA NGHLYLAQPP LYKVAKSGKG KDKILYAYSD DELEEVKKKV GKGATIQRFK GLGEMNPDQL WETTLNPETR TLVQVTIEDA AKAEKMVSLL MGDVVQPRKN YMYKYAEF
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