Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2318 |
Symbol | nifJ |
ID | 4203301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2570072 |
End bp | 2573587 |
Gene Length | 3516 bp |
Protein Length | 1171 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638083183 |
Product | pyruvate-flavodoxin oxidoreductase |
Protein accession | YP_696741 |
Protein GI | 110801224 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATGA GAAAAATGAA AACTATGGAT GGTAACACAG CTGCCGCTTA TATATCATAT GCGTTCACTG ATGTTGCAGC AATATTCCCT ATCACTCCAT CATCACCAAT GGCAGAGTGG GTTGATGAAA ACAGTGCAAG AGGATTAAAG AACATATTTG GTCAACCTGT AAAAGTAATG GAAATGCAAT CAGAAGCAGG TGCTGCTGGA GCAGTTCACG GTTCATTACA AGCTGGAGCT TTAACTACTA CTTACACAGC TTCACAAGGT TTATTATTAA TGATACCAAA CATGTACAAA ATAGCTGGTG AATTATTACC ATCAGTATTC CATGTATCAG CTAGAGCATT AGCTACTTCA GCATTAAACA TCTTCGGTGA TCACCAAGAC GTTATGGCTG CAAGACAAAC TGGATTCGCT ATGTTAGCAG AAGGATCAGT TCAAGAGGTT ATGGATTTAT CAGCAGTTGC TCACTTAGCA GCTCTTAAAG CTAGAATACC TTTCGTAAAC TTCTTCGATG GATTCAGAAC ATCACATGAA ATACAAAAAG TTGAACTTTT ACAATACGAT GAATTAAAAG AATTAGTAGA TATGGAAGCT GTAGAAGAGT TCAGAAGAAG AGCTCTTAAC CCTAACAAGC CTGTTACAAG AGGTACAGCT CAAAACCCAG ACATCTACTT CCAAGAAAGA GAAGCAGTAA ACAAATTCTA CGATGCAGTT CCAGAAATAG TTGAGAGCTA CATGAAAGAA ATCACTAAGT TAACTGGTAG AGAGTACAAC TGTTTCGATT ACTATGGAGC AGCAGATGCT GAAAGAGTTA TCGTAGCTAT GGGATCAGTT ACTGACTTAA TAGAAGAAAC TGTAGACTAC TTAAACGCTA AAGGAGAAAA AGTTGGTTTA ATCAAAGTAA GATTATTCAG ACCATTCTCA AATGAAAGAT TAATAAAAGC AATGCCAAAA ACTGTTAAAA AGGTTGCTGT TTTAGATAGA ACTAAAGAAC CAGGTGCTGC AGGAGAACCT CTATACTTAG AAGTTAAGAA TGCATTCTAC GGATTAGAAA ATGCTCCTGT AATAGTTGGT GGTAGATTCG GATTAGGATC AAAAGATACT GTACCAGCTG ATATCGTTGC TGTTTACGAA AACTTAAATA AAGAGGATGC TAAAAATGGA TTCACTTTAT CAATAGTTGA TGACGTAACT AACACTTCAT TAGAACCAGT TGGAGACATA GATACTACTC CAGAAGGAAC TAAAGCTTGT AAGTTCTGGG GATTAGGATC AGACGGAACA GTTGGAGCTA ACAAGAGTGC TATCAAAATC ATCGGAGACC ATACTGACAT GTATGCTCAA GGATACTTTG CATATGACTC TAAAAAATCA GGTGGGGTTA CAATTTCTCA CTTAAGATTC GGTAAACAAC CAATAAAATC ACCTTACTTA ATAAACAAAG CTGATTTCGT TGCTTGTCAT AACCAATCAT ATGTTAACAA ATACTTCGTT TTAGATGGAT TAAAGAAAAA CGGAACATTC TTATTAAACA CTATCTGGAC TCCAGAAGAA GTTGCTGAAC ATTTACCAGC AAGTTATAAG AGATTCTTAG CTGAAAACAA CATTAAGTTC TATACTTTAA ATGCTGTTAA GATAGCTCAA GAAGTTGGAT TAGGTGGAAG AATCAACATG ATCATGCAAT CAGCATTCTT CAAACTAGCT AACATAATAC CAGTAGAAGA CGCAGTTAAA TACTTAAAAG ATGCTGTTGT AACTTCATAC GGTAAAAAAG GTGAAAAAGT TGTTAACATG AACCACGCTG CTATAGACAA AGGAATCGAC GCTATCGTTG AAATCACTGT TCCAGCTGAG TGGGCTAACG CTAAAGATGA AGTTGTTGAA GCTAAAGAAG TTCCAGCATT CATCAAAAAC ATTGTTGAAC CAATGAACAG ATTAGAAGGA GATAAACTTC CTGTATCAGC ATTCAACGGA ATGGAAGATG GTACTTTCGA ACCAGGTACT GCTGCATACG AAAAGAGAGG AATCGGTATA AACATACCAG AATGGATAGC AGACAACTGT ATCCAATGTA ACCAATGTGC TTACGTTTGT CCTCATGCTA CAATAAGACC ATTCTTATTA ACTGAGGAAG AAGCTAAAAA TGCTCCTGCT TCAACTAAGT TAGTTGCTGC TAAAGCATTA AAAACTGAAG AGCCAATGCA ATTCACTATG GCTGTAAGTA CTTTAGACTG TACTGGATGT GGAAACTGTG CTCAAGTTTG TCCTGCTAAG GAAAAAGCTT TAGTTATGAA ACCACAACAT ACTCAAGAAG ATCAAATAGA AGCTTGGGAT TACTGTGTAA ATGATGTTGC ACCTAAGAAA AACCCAATGA ACAAAAACAC AGTTAAAGGT AGCCAATTCG AGCAACCATT ATTCGAGTTC TCAGGAGCTT GTGCTGGATG TGGAGAAACT CCATATGCTA AACTTATAAC TCAATTATTC GGAGATAGAA TGATGATAGC TAACGCTACT GGATGTTCAT CAATCTGGGG TGGATCAGCT CCTTCAACTC CATACACAAC TAACCACAAT GGTCATGGAC CAGCTTGGGC TAACTCATTA TTCGAGGACA ACGCTGAATT CGGATTAGGT ATGTTCTTAG GAGTTAAAGC TATAAGAGAA AGATTAGTTG ATCTTGCTGG AAAAGCAATT GAAGCTGGTG TTAAACCAGA AGCTAAAGAA GCTTTAGAAG CTTGGATAGC TGAAGTTGAC AACGGAGAAG GAACTAGAGA TAGAGCTGAC GCTGTTGTAG CTGCATTACA AGGTGAAACT AACGAGTTCG CTAAAGAAAT ATTAAAAGAT CAAGACTACT TAGCTAAGAG ATCACAATGG ATCTTCGGTG GAGACGGATG GGCTTACGAC ATCGGTTACG GTGGAGTTGA CCACGTTTTA GCTAGTGGAG AAGATGTAAA CATACTTGTT ATGGATACAG AAATCTACTC AAATACTGGT GGTCAGGCTT CTAAATCAAC TCCAACTGCT GCTATCGCTA AATTCGCTGC TGCAGGTAAG AGAACTAAGA AGAAAGATTT AGGAATGATG GCTATGAGCT ATGGTTATGT ATATGTTGCT CAAATAGCTA TGGGTGCAGA TAAGAACCAA ACTCTTAAAG CTATAGCTGA AGCTGAAGCA TACAAAGGAC CATCATTAAT AATAGCTTAC GCTCCATGTA TCAGCCACGG ATTAAAAGCT GGTATGGGTA ACTCTCAATT AGAAGAGAAG AGAGCTGTTG AATGCGGATA CTGGGCTATG TATAGATTCA ACCCAATGTT AAAAGAAACT GGTAAGAATC CATTCTCATT AGACTCTAAA GAACCAACTG GTGATTTCAG AGAATTCATA ATGGGAGAAG TTAGATACGC TGCATTAGCA AAAGCATTCC CAGAAGCTGC TGAAGCTTTA TTCGAAAAGA CTGAAAGAGA TGCTAAAGAA AGATTAGAAA ACTACAAAAA ACTTGCTGCA AACTAG
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Protein sequence | MAMRKMKTMD GNTAAAYISY AFTDVAAIFP ITPSSPMAEW VDENSARGLK NIFGQPVKVM EMQSEAGAAG AVHGSLQAGA LTTTYTASQG LLLMIPNMYK IAGELLPSVF HVSARALATS ALNIFGDHQD VMAARQTGFA MLAEGSVQEV MDLSAVAHLA ALKARIPFVN FFDGFRTSHE IQKVELLQYD ELKELVDMEA VEEFRRRALN PNKPVTRGTA QNPDIYFQER EAVNKFYDAV PEIVESYMKE ITKLTGREYN CFDYYGAADA ERVIVAMGSV TDLIEETVDY LNAKGEKVGL IKVRLFRPFS NERLIKAMPK TVKKVAVLDR TKEPGAAGEP LYLEVKNAFY GLENAPVIVG GRFGLGSKDT VPADIVAVYE NLNKEDAKNG FTLSIVDDVT NTSLEPVGDI DTTPEGTKAC KFWGLGSDGT VGANKSAIKI IGDHTDMYAQ GYFAYDSKKS GGVTISHLRF GKQPIKSPYL INKADFVACH NQSYVNKYFV LDGLKKNGTF LLNTIWTPEE VAEHLPASYK RFLAENNIKF YTLNAVKIAQ EVGLGGRINM IMQSAFFKLA NIIPVEDAVK YLKDAVVTSY GKKGEKVVNM NHAAIDKGID AIVEITVPAE WANAKDEVVE AKEVPAFIKN IVEPMNRLEG DKLPVSAFNG MEDGTFEPGT AAYEKRGIGI NIPEWIADNC IQCNQCAYVC PHATIRPFLL TEEEAKNAPA STKLVAAKAL KTEEPMQFTM AVSTLDCTGC GNCAQVCPAK EKALVMKPQH TQEDQIEAWD YCVNDVAPKK NPMNKNTVKG SQFEQPLFEF SGACAGCGET PYAKLITQLF GDRMMIANAT GCSSIWGGSA PSTPYTTNHN GHGPAWANSL FEDNAEFGLG MFLGVKAIRE RLVDLAGKAI EAGVKPEAKE ALEAWIAEVD NGEGTRDRAD AVVAALQGET NEFAKEILKD QDYLAKRSQW IFGGDGWAYD IGYGGVDHVL ASGEDVNILV MDTEIYSNTG GQASKSTPTA AIAKFAAAGK RTKKKDLGMM AMSYGYVYVA QIAMGADKNQ TLKAIAEAEA YKGPSLIIAY APCISHGLKA GMGNSQLEEK RAVECGYWAM YRFNPMLKET GKNPFSLDSK EPTGDFREFI MGEVRYAALA KAFPEAAEAL FEKTERDAKE RLENYKKLAA N
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