| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2305 |
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| Symbol | sigF |
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| ID | 4201171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2553296 |
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| End bp | 2554051 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638083170 |
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| Product | sporulation sigma factor SigF |
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| Protein accession | YP_696728 |
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| Protein GI | 110799417 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAA GTAGTATTGA GAAAGATAAT TTTAATTATG ACAAAAATAC AACTCTCATA
GTCATGGCTA AAGAAGGAAA TAAGGAGGCA ATGAATAAGC TTATAGAAGT TAATACTCCT
TTAGTTTCTT CAATATGCAA GAGATTTACA AATAGAGGGT ATGACTATGA GGATATATTT
CAGATTGGGT CAATGGGATT AGTTAAAGCT ATAAACAACT TTAATGATAG TTTTAATGTT
AAATTTTCAA CTTATGCTGT GCCTATGATT ATAGGTGAAA TAAAGAGATT CTTAAGGGAT
GATGGAATAA TAAAAGTAAG TAGAAGCACT AAGACTTTAG CTAAAAAGCT TCATTACAAT
AAGGAAGAAC TAATAAAAAA ATTAAATAGG GATCCTACTG TAGATGAATT AGCTGAATAC
TCTGGTGTTG ATAAGGAAGA GGTAATAGTA GCCTTAGAAT CAGCAAGCAG TATGCAATAT
CTATATGACA CTATACACCA TGATGAAGGA ACACCGGTTC TCTTAATAGA TAAACTTAGT
GAGAAGGGTG AAGATGATGA CATGGTTAAT AAAATAGCTT TAAGAGAGGC TATTAGTTCA
TTAGATTCAA AGGGTAAGCA AATCATAATG CTTAGGTATT TCAAGGATAA AACTCAAATT
CAAGTTGCAA AAATGCTTGG TATAAGTCAA GTTCAAGTTT CTAGAATAGA GAAAAAGGTA
CTAAAAATTA TGAAAGAAAA ATTAGAAGAG GATTGA
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| Protein sequence | MDISSIEKDN FNYDKNTTLI VMAKEGNKEA MNKLIEVNTP LVSSICKRFT NRGYDYEDIF
QIGSMGLVKA INNFNDSFNV KFSTYAVPMI IGEIKRFLRD DGIIKVSRST KTLAKKLHYN
KEELIKKLNR DPTVDELAEY SGVDKEEVIV ALESASSMQY LYDTIHHDEG TPVLLIDKLS
EKGEDDDMVN KIALREAISS LDSKGKQIIM LRYFKDKTQI QVAKMLGISQ VQVSRIEKKV
LKIMKEKLEE D
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