Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2291 |
Symbol | grpE |
ID | 4202666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2539540 |
End bp | 2540166 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638083156 |
Product | heat shock protein GrpE |
Protein accession | YP_696714 |
Protein GI | 110799800 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGATA ATAAAGATTT TAACGAAGAG TTAAAGGAAA ATATCCAAGA AGAATTAGAT AACGAAACAA AAGCTGAAAA TCCTAATATT GATGAAGAGG TAGAAGAAGT TTCAGAAGAT ATTAAGGCTG ATGAAAAAGT TATTGATTTT GAAGAATTAA AGGCTTTAAA GGAAGAAAAT ACTATGTTTA AAAGTAAAAC AAAGAAATTA GAAAATGAAT TAGAGGCCTT AAAAGATAGA TTATTAAGAA TATCTGCAGA GTATGAAAAC TACAGAAAAA GAACAGATAA AGAAAAAGAA AGAATATATA CTGATGCATG TGAAGATGTT TTAATCAAAA TGCTTCCAGT ATTAGATAAC TTAGAAAGAG CCTTAGCTGT AGATGGAACT GTTGAAGATC TTAAAAAAGG TGTTGAAATG ACAGTAAGAC AATTTGAGGA TGCTTTAGAA AAACTTCAAG TTGAAGAAAT ATCTACAGAA AATGGTTTTG ATCCAGAATT ACATCAAGCA ATGATGGTTG TGGAACAAGA AGGCGCAGAG CCAAATCAAG TAGCTCAAGT ATTCCAAAAA GGATACAAGA GAGGGGATAA GGTTATCAGA CATTCAATGG TAACTGTAAC TAAATAA
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Protein sequence | MVDNKDFNEE LKENIQEELD NETKAENPNI DEEVEEVSED IKADEKVIDF EELKALKEEN TMFKSKTKKL ENELEALKDR LLRISAEYEN YRKRTDKEKE RIYTDACEDV LIKMLPVLDN LERALAVDGT VEDLKKGVEM TVRQFEDALE KLQVEEISTE NGFDPELHQA MMVVEQEGAE PNQVAQVFQK GYKRGDKVIR HSMVTVTK
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