| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2283 |
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| Symbol | |
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| ID | 4202222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2531171 |
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| End bp | 2531923 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638083148 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_696706 |
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| Protein GI | 110798700 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAAGT TTTTTACACC AGCGCATATG TTTTCAGACA CTCATGCCAC AATAACAGGG
GAAGATGTAA AACATATTTA TAAGGTTTTA AGGGTAAAAC CAGGTGAGAA GGTTGTTGTA
AATAACCTTG AAAGTGAAGA GTTTTTAGGT GAGGTAGAAG AGGTTAATAA ACAAGAGGTT
TCTATCAAAA TCTTAGAGAA GCTTGATGTA AACAATGAAA GTAATTTAAA TATTACTTTA
TTTCAAGGAA TGCCAAAGGC TGCAAAAATG GATTTAATAG TTCAAAAATG TGTAGAACTT
GGTGTTTCAG AAATAATTCC AACAATCACT GATAGAGTAG ACGTTAAATT AAAAGGTGAA
TTTAAAAAAT TAGATAGATT AAATAAAATC GCTTTAGAGG CATGTAAACA AAGTAAAAGA
ACGGTAATAC CACAAGTATT AGAACCAATG GACTTTAAAG AGGTTTTAGA AAAGATAGAT
CAATTAGACC TTATGGTTAT TCCTTATGAA AATGCTACAG GATACGGAAT AAGAGCTATG
GTTAACTCTA TAGAGGATAA AGATAGTATA AAAAATGTTG GAATAATGGT TGGGCCAGAA
GGCGGATTTG AAGAAAGTGA AATAGAAGCC CTAAAAGAAA AAGGAGCTCA TATTGTAACT
TTAGGACCAA GAATTTTAAG AACAGAGACA GCAGGATTTA CCTGTATTTC TCTTATTCAG
TATGAGCTTG GTGATTTAGG AGGAAATATT TAA
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| Protein sequence | MHKFFTPAHM FSDTHATITG EDVKHIYKVL RVKPGEKVVV NNLESEEFLG EVEEVNKQEV
SIKILEKLDV NNESNLNITL FQGMPKAAKM DLIVQKCVEL GVSEIIPTIT DRVDVKLKGE
FKKLDRLNKI ALEACKQSKR TVIPQVLEPM DFKEVLEKID QLDLMVIPYE NATGYGIRAM
VNSIEDKDSI KNVGIMVGPE GGFEESEIEA LKEKGAHIVT LGPRILRTET AGFTCISLIQ
YELGDLGGNI
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