| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2206 |
|---|
| Symbol | |
|---|
| ID | 4203148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2446345 |
|---|
| End bp | 2449890 |
|---|
| Gene Length | 3546 bp |
|---|
| Protein Length | 1181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638083071 |
|---|
| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein |
|---|
| Protein accession | YP_696630 |
|---|
| Protein GI | 110799312 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA AAGTAAGGGA TAAGAAATTT ACAGCATTAG CAGTTGCTAC TTCAATGATC
TTTGGAATTG CAACACCGTT AACTACTGTA AAGGCTACTG AAAATTTAGC ACCGGAAAAC
CTAGAGAAAA AAGGAGAAGA AGCTAGTTTA GAAAAAGAAG GAGATGTAAC TATTCAGATT
TTAGGTACAT CAGACCTTCA TGGTAGATTT ATGAATTATG AGTATGCTCG TAATCAAAAA
TCTGATGGTG GATTAAATCA AATATCCACA TTAGTTAATG AAGCTAGAAA TGAAAATCCT
AATACAATAG TGGTTGATAA TGGAGATACT ATACAAGGAA ATTTCAATCA CTTATTTAAA
AATGGTCCTA ATCCTATGGT TATGGGAATG AATGCTATAG GATATGATGT TTTCTCTTTA
GGAAATCATG AATTTAACTA TGGAATGGAC AACCTTAATG ATGTTGTAAG TCAAGCTAAT
GATAATTTAG ATGTATTATG TGCAAATCTT TATAAAGATG GTAAGAGGGT TTATGAAGGA
TATACAACTA GGGAAATAGA AGGCGTTGAA GTTGCTCTAA TTGGAGTTGT AAGTCCTCAT
ATAATGAAAT GGGATTCAGA AAATTTAAAA GGATATGAGG CTAAAAATCC TGCAGAAGAA
GTTGGATTTG TAATAGATGA AATAGAAAAT AGACCTGAGG GTGGCGCTGA TGTTTATGCA
GTAGTTTCAC ATGTGGGATT AGAAAGTGAA TATGGTAATG GAGATAGTGC TAGAGCCATA
GCTGAAATGA ACCCAGAGGT ATCTGCCATA GTTGCAGGAC ATAGTCATAC TAATGTACCA
GAAGAAAAAA TAAACAATGC AGTTATAAGC CAACCTACAA GTAATGGTCA AATGGTTTCT
AAAATAGAAT TAACTGTTAG AAAAAATGGA GAAAAAGTAG AAGTTGTAGA TAAAAAGTCT
AAATTATTAA GCACAAAGGG TGTAGCAGAG GATCAAAAAA TAAATGATTT ACTTTCTGAT
TTTCATAACA CAGCAATTGC TGATGCAACA GCACCTGTTG GCGAAATGGT TGGAGGAGAT
CTTGCTGATA AAAATGAAAT AAAAGAAATT CCACAATCAT TAGTTGAAGA TCAAGGTATA
ACTGACTTTA TAAATGAAGT TCAATTATAT AATAGTAGAA AGCATTTAGA ATCAAAGAAT
ATAAATCCAG ATGAGGTTTA TATGGTTTCT GGAGCAGCTT TATTTAGTGC TTCATCAAAC
TTATATGAAG GAAATATAAG CAAAGCAGAT ATTTCAAATA TTTATAGATA TGATAATAAA
TTATATACTA TAAAAACAAA TGGAAAGCAA CTTAAAAAGT ATATGGAAAA AAATGCTGAG
TATTATAATA CTTATAAAGA TGGGGATTTA ACAGTATCTT TCAATGAAGA TGTTAGAATG
TATTTATATG ATATGTTTGA TGGAGTAAGT TATGAAATAA ATATATCTAA AGAGCCAGGT
CAAAGAATTG AAAACTTAAA GTTTGAAAAA GATGGTAAGC CAGTTGAAGA CTCAGATGTA
GTTTATTTAA CAGTAAATGA TTATAGATAT AATTCTGGCT TAGCTGCTGG AATAATGGAC
CAAGGTGAGC ATGAGAAAAT ATATGATACA AATAATGATC AAATATCAGA TATGAGAGAT
TTAATAGTTG ATTATATTCA AAATGTAAAA GGTGGAAAAA TTACTAAAAA CATTGATAAT
AACTGGAAGA TAACAGGTAA TGATTGGGAT TCAGAACAAA GAGAATTAGC TGTTAAACTT
ATAAATGAAG GTAAAATAAA AATACCTGTA TCAGAAGATG GAAGAACTCC AAATGTAAAA
GCTGTAACTT GGAATGATGT TTTAGAAGCT TTAGGAACTA AGGAAGTTGA AATACCAATA
GTTACTTTCA ACGATTTCCA TGGATCTTTA GCAGAATCTA AGAGTGATGT TGGAGCAGCT
AAGTTAGTTG GAGAAATAAA GAGAGTAAAA GAAGAAAATC CAAATACTGT AGTTGTTACA
GGTGGAGATA TATATCAAGG AAGTGCTATG TCAAATCTTT TAAAAGGTGA GCCAGTTACT
GCTATGCTTA AGGAAATGGG CTTAGAATTT TCAGCAGTTG GTAACCATGA GTTTGACTGG
GGATATGAAT ATATACCAGA CTGGGCTAAA GCTGGAGAAT TTGATTTCTT AGCATCAAAT
ATATATGAAA AAGAAACTGG AAAACCAGTT GAATGGGCTA AGCCTTATGG CGTTGTTGAA
AGAGAAGGAA AGAAAGTTGG ATTTATAGGA CTTGCTACTC CTGAAACTGC ATACAAGACA
AAACCAGATA ACGTTGCTCA TTTAGAATTT AAAGATCCTG TAGAAGCAAC TAAGACTTGG
GTAGATTATT TAGAAAATAA AGAAAATGTA GATGCCGTTG TTGTTTTAAG TCATTTAGGA
AGTGAACAAA ATAGAGAGAC TGGAGAAATA ACTGGTGAGA TTGTTGAAGT TGCTGAAGTA
CCAGGAGTTG ATGCTATAAT ATCAGCTCAT AGTCACCAAA AAGTTGAAGG AAAAGTTAAT
GGAGTACCAG TTATACAAGC GTATAAAAAT GGTAGAAATT TAGGATATGT TAACTTAAAA
TTTGACTATA AAGATGAATT AGTAGTTACA ACTAAACTTG ACGATATTTC TAAGAGAAAA
GATACTCTTC CAGTTGATAA GAATATGGAA GATATATTAG CAAAATTTGA AGCTGATTTA
GCTCCTATAA TGAATGAAAA AGTTGCTGAT TTATCAGTAG ATTTACCACA TGATAGAGAT
ACTGGAGTAA GTCCTATGGG GGCTACTGTA GCTGAAACTA TGAGAAGAAT AGTTGATGCT
GATATAGCAA TAACTAATGG TGGAGGAGTA AGAGCCCCAT TAATGGCTGG AACAGTTACT
GTTGGAGATA TGTACACAAT ACTTCCATTT GACAATACTT TAGTTACAAT GGAAATGAAA
GGTTCAGATA TAATAAAAGT TTTAGAGCAT GGAATAGAAC CAGATAACTT TGGATGGGGA
CAACATGCTG GTGTTAAACT TTGGTACACT CCAGGAGCTG AAAGAGGAGA AAAGATAACT
TCTGTTAGAT TAGCTGATGG AACTAAATTA GAAAATGACA AGTATTATAC AGTAGTTACT
AATGATTTCA TGGCTGTAGG TGGAGATTCT TATGATTTCT CAGCTGCTAA AAATGTAGTG
GATACAAACT TAGTTATAAG AGATGAAATG GCAAATTATT GGAGAGAAAA TGGAATAGAT
CCTATAACTG ATTTATCTAC TTTATTAGAA GCTGGTGAAG ATACAACTGT TGATTCAGAA
AAACCTGAAA ATCCAGAAAA TCCAGGTAAC CCAGAAACAC CACAAAATCC AGAAAATCCT
GATAATGGTG AAAACTTACC TAACACAGGT ATGCCATTTG GAACTGGAGC AGTGGCTGCT
ATGGGTACAG TATTAACAAT TGGTGGACTA GCTGTATTAA GAAAGAAAAA GAATAATGCT
GCATAG
|
|---|
| Protein sequence | MLKKVRDKKF TALAVATSMI FGIATPLTTV KATENLAPEN LEKKGEEASL EKEGDVTIQI
LGTSDLHGRF MNYEYARNQK SDGGLNQIST LVNEARNENP NTIVVDNGDT IQGNFNHLFK
NGPNPMVMGM NAIGYDVFSL GNHEFNYGMD NLNDVVSQAN DNLDVLCANL YKDGKRVYEG
YTTREIEGVE VALIGVVSPH IMKWDSENLK GYEAKNPAEE VGFVIDEIEN RPEGGADVYA
VVSHVGLESE YGNGDSARAI AEMNPEVSAI VAGHSHTNVP EEKINNAVIS QPTSNGQMVS
KIELTVRKNG EKVEVVDKKS KLLSTKGVAE DQKINDLLSD FHNTAIADAT APVGEMVGGD
LADKNEIKEI PQSLVEDQGI TDFINEVQLY NSRKHLESKN INPDEVYMVS GAALFSASSN
LYEGNISKAD ISNIYRYDNK LYTIKTNGKQ LKKYMEKNAE YYNTYKDGDL TVSFNEDVRM
YLYDMFDGVS YEINISKEPG QRIENLKFEK DGKPVEDSDV VYLTVNDYRY NSGLAAGIMD
QGEHEKIYDT NNDQISDMRD LIVDYIQNVK GGKITKNIDN NWKITGNDWD SEQRELAVKL
INEGKIKIPV SEDGRTPNVK AVTWNDVLEA LGTKEVEIPI VTFNDFHGSL AESKSDVGAA
KLVGEIKRVK EENPNTVVVT GGDIYQGSAM SNLLKGEPVT AMLKEMGLEF SAVGNHEFDW
GYEYIPDWAK AGEFDFLASN IYEKETGKPV EWAKPYGVVE REGKKVGFIG LATPETAYKT
KPDNVAHLEF KDPVEATKTW VDYLENKENV DAVVVLSHLG SEQNRETGEI TGEIVEVAEV
PGVDAIISAH SHQKVEGKVN GVPVIQAYKN GRNLGYVNLK FDYKDELVVT TKLDDISKRK
DTLPVDKNME DILAKFEADL APIMNEKVAD LSVDLPHDRD TGVSPMGATV AETMRRIVDA
DIAITNGGGV RAPLMAGTVT VGDMYTILPF DNTLVTMEMK GSDIIKVLEH GIEPDNFGWG
QHAGVKLWYT PGAERGEKIT SVRLADGTKL ENDKYYTVVT NDFMAVGGDS YDFSAAKNVV
DTNLVIRDEM ANYWRENGID PITDLSTLLE AGEDTTVDSE KPENPENPGN PETPQNPENP
DNGENLPNTG MPFGTGAVAA MGTVLTIGGL AVLRKKKNNA A
|
|---|
| |