| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2196 |
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| Symbol | secF |
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| ID | 4201221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2437047 |
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| End bp | 2437916 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083061 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_696620 |
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| Protein GI | 110799216 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTAAAA TTGTAGAGAA GAAGAAAATA TGGTTTACTA TATCAATTCT TATAATTGTT
ATAGGTTTTG GATTTATGTT TACTAAAGGT ATGAACTTTG GAATCGACTT TAGAGGGGGT
ACTCAGGTTG TAATAAACAT GGGTACAGAT TTTAATAAAA CCGATGTTGA TAAAATTGTA
GATGAATATT CAAAGGATGC CGTTACAAAT CAAGTTAATG GTACTGAAAT TCAAATAAAA
GCAAAAGAGT TAAATAGTTC TCAAGTTAAT GATATCTTTA AGGCTCTTAA AGAAAAATAT
GATTTAAAAG ATGATGCCTT AGTATCACAA AATGAGATTG GGGCTTCAGT AGGAAGAGAT
TTAACAACAA ATGCCATAGT AGCTCTTGTG ATAGCCGTAA TAGGTATGCT TATATACGTA
GTTATAAGAT TTGAATTCTC TTTTGGTATT GCAGCTATAA TAGCTCTATT ACATGATGTA
TTAATAACTA TAAGTGTTTA TGCTGTATTT GGAATAACAA TAAATACTCC ATTTATAGCG
GCTATACTTA CAATAGTAGG TTATTCTATA AATGATACAA TAGTTATATT TGATAGAATA
AGAGAAAATA GAAAAAAACT TAGAGGAAAA TCTGTGGAAG AGATTGCAGA CATGAGTATA
ACTCAAACAA TGTCAAGATC TATAAATACA ACACTTACAA CTTTAATCAC TATAGTTTGT
GTTTATATAT TTGTTCCTAC AGTTAGAGAT TTTGCTTTCC CATTAATAGT TGGTATAGCA
TCAGGAGCTT GTTCTTCAAT ATTTATAGCA AGTCCAATTT GGTGTATTTT AGCTAACAGA
CAAAAAAATA AAAAGGCAAG AAATAAGTAA
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| Protein sequence | MLKIVEKKKI WFTISILIIV IGFGFMFTKG MNFGIDFRGG TQVVINMGTD FNKTDVDKIV
DEYSKDAVTN QVNGTEIQIK AKELNSSQVN DIFKALKEKY DLKDDALVSQ NEIGASVGRD
LTTNAIVALV IAVIGMLIYV VIRFEFSFGI AAIIALLHDV LITISVYAVF GITINTPFIA
AILTIVGYSI NDTIVIFDRI RENRKKLRGK SVEEIADMSI TQTMSRSINT TLTTLITIVC
VYIFVPTVRD FAFPLIVGIA SGACSSIFIA SPIWCILANR QKNKKARNK
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