| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2074 |
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| Symbol | ispA |
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| ID | 4202496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2314134 |
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| End bp | 2315006 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082939 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_696503 |
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| Protein GI | 110799631 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00203562 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTA ATAGCTTAAA AGAGGAAGTT GATCAATCTT TAAAAGCTTA TTTTAATAAA
GATAGAGAAT ACAATAAAGT TTTATATGAT TCAATGGCAT ATAGCATAAA CGTAGGAGGA
AAAAGAATAA GACCAATCTT AATGCTTTTA TCTTACTATA TTTATAAAAG TGATTATAAA
AAAATATTAA CACCTGCAAT GGCCATAGAA ATGATACACA CTTATTCTTT AATACATGAT
GATTTACCAT GTATGGACAA TGATGATTTA AGAAGAGGAA AACCTACAAA TCATAAGGTT
TTTGGAGAAG CTATTGCTGT TTTAGCTGGA GATGCTCTTT TAAATGAAGC TATGAAAATT
TTAGTTGATT ATTCTTTAGA AGAAGGAATA AGTGCATTAA AGGCAACTAA AATAATTGCA
GATGCAGCAG GATCAGATGG AATGATTGGT GGTCAAATTG TTGATATAAT AAATGAAGAT
AAGGAAGAAA TTTCTTTAAA AGAATTAGAT TATATGCATT TAAAGAAAAC TGGAGAACTT
ATAAAAGCTT CAATAATGTC TGGAGCGGTT TTAGCAGAAG CTTCAGAGGG AGATATTAAA
AAATTAGAGG ATTTTGGATA TAAGTTAGGC TTAGCATTTC AAATAAAAGA TGATATATTA
GATGTAGTGG GAAATGCAAA AGATTTAGGG AAGAATGTTC ACAAAGACCA AGAAAGCAAT
AAAAATAATT ATATAACCAT TTTTGGATTA GAAGAGTGTA AGAAAAAATG CGTGAATATA
ACTGAGGAAT GTATAGAGAT ATTAAGTTCA ATAGAAGGAA ATACAGAGCC TCTAAAAGTT
TTAACCATGA AACTTTTAGA GAGAAAATTT TAA
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| Protein sequence | MNINSLKEEV DQSLKAYFNK DREYNKVLYD SMAYSINVGG KRIRPILMLL SYYIYKSDYK
KILTPAMAIE MIHTYSLIHD DLPCMDNDDL RRGKPTNHKV FGEAIAVLAG DALLNEAMKI
LVDYSLEEGI SALKATKIIA DAAGSDGMIG GQIVDIINED KEEISLKELD YMHLKKTGEL
IKASIMSGAV LAEASEGDIK KLEDFGYKLG LAFQIKDDIL DVVGNAKDLG KNVHKDQESN
KNNYITIFGL EECKKKCVNI TEECIEILSS IEGNTEPLKV LTMKLLERKF
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