Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2072 |
Symbol | |
ID | 4201828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2311427 |
End bp | 2312242 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082937 |
Product | hemolysin A |
Protein accession | YP_696501 |
Protein GI | 110800396 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.759279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AAAAAGAGAA AAAAGAAAGA CTTGACGTAC TTCTTGTTGA ACAAGGTATT GCTGAGTCAA GAGAAAAAGC TAAGAGATAT ATAATGGCAG GTATGGTATT CATAGGAGAA AAGAGAGTTG ATAAGGCTGG AGAAAAGGTT CCTGTAAGCT CAAATATCAT ATTTAGAGGA GAAAAACTAC CTTTTGTTAG TAGAGGTGGA TTTAAACTTG ATAAGGCAGT TAAATCCTTT GGAATAGACC TTAAAGGAAA GAGATGCTTA GATATTGGAG CATCAACTGG TGGATTTACT GACTGTATGC TTCAAAATGA TGCTTCAAAA GTATTTTCAA TTGATGTTGG TTATGGACAA TTTGCTTGGA AACTTAGAGT AGATCCAAGA GTTGTTTGTA TGGAAAGAAC TAACGTAAGA TATGTAACCC CAGAGCAAAT AGGAGAATTA TGTGATTTTG CATCAATAGA TGTATCTTTT ATATCACTAA CAACAGTTTT GCCAGCTGTA CTTAATCTTT TAAATGATAA GGGAGAAGTT ATGGCACTTA TTAAGCCTCA ATTTGAAGCT GGCAGAGAAA AGGTTGGCAA AAAAGGTGTT GTAAGAGAAG CTTCTACTCA TAAAGAAGTA ATTAAGAAAA TTGTTGATTT TGCTTTATCA CACAAATTAA ATATATTAGG TCTTGATTTC TCTCCTATAA AAGGACCAGA AGGAAATATA GAATATTTAA TATATTTAAA GAAGGATAAC AATACAGAAG AGTTTGATTA TAATATTATA GATGAAGTTG TAGATAAATC TCATAGTGAT TTATAA
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Protein sequence | MAEKKEKKER LDVLLVEQGI AESREKAKRY IMAGMVFIGE KRVDKAGEKV PVSSNIIFRG EKLPFVSRGG FKLDKAVKSF GIDLKGKRCL DIGASTGGFT DCMLQNDASK VFSIDVGYGQ FAWKLRVDPR VVCMERTNVR YVTPEQIGEL CDFASIDVSF ISLTTVLPAV LNLLNDKGEV MALIKPQFEA GREKVGKKGV VREASTHKEV IKKIVDFALS HKLNILGLDF SPIKGPEGNI EYLIYLKKDN NTEEFDYNII DEVVDKSHSD L
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