Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2037 |
Symbol | mnmA |
ID | 4203221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2277896 |
End bp | 2278975 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638082904 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_696468 |
Protein GI | 110801338 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAAGA AAAAGGTTGT TATAGGTATG AGCGGCGGAG TTGATAGCTC CGTTGCTGCT TACCTTTTAA AGGAACAGGG ATACGATGTA ATTGGTGTTA CAATGCAAAT ATGGCAAGAG GATAAGGAAT ATGAGGAAAG AGAAGGTGGA TGTTGTTCAC TGTCAGCAGT GGATGATGCT AGAAGAGTTG CTCAAAAACT AGATATTCCT TTTTACGTTT TAAACTTTAG AGATAGTTTT AAAAGAAATG TAATAGATTA TTTTGTAGAC GAATATATAC AAGGTAGAAC TCCAAATCCA TGTATTGCAT GTAACAAATA TCTTAAATTT GATGAGCTTT TACAAAAAGC TAAAGGTATA GGTGCAGACT ATGTTGCAAC AGGTCACTAT GCTAAAATTG AAGAAAGAGA TGGAAGATTC CAACTTATAA GATCAAAGGA TGATAGAAAA GATCAAACTT ATGCTTTATA CAATCTAACT CAAGAACAGT TAGAGCATAC TTTAATGCCT TGTGGAGAAT TCACTAAGGA TAAGATTAGA GAAATAGCTA AAGAGATCGG TCTAGATGTA CATAATAAAA AGGACAGTGA AGAAATATGC TTTATTCCAG ATAATAATCA TGGAAGATAC ATATGTGAAG CTGCTCCAAA CAAAGTTAGA CCAGGAAACT TTGTCGATAA GTATGGAAAT GTCTTAGGAA AACATAAAGG AATAGTCTAT TATACAATAG GACAAAGAAA GGGCTTAGGA TTAGCTCTTG GAAGACCAGT GTTTGTTACT GATATAAACC CTGTAACTAA TACTGTTGTA GTAGGACCAG AAGAGGATAT CTTTAAAACT GATTTAGTTT GTAAAGATAT AAATTTCATA TCTATAGATA AACTTGAAGG CCCTATGGAA GTTGAAGCTA AAATTAGATA TTCAGCTAGA CCAGCTAAGG CTACTATAAG TCCTATGGAA AATGGAAGAG TTAAAGTTTC TTTTGAAGAT AAGCAAAGAG CTATAACTAA AGGTCAATCT GTTGTTTTCT ATAAAGATGA TTTAGTTGTA GGTGGAGGAA TAATCGAAAG CCTACTTTAA
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Protein sequence | MTKKKVVIGM SGGVDSSVAA YLLKEQGYDV IGVTMQIWQE DKEYEEREGG CCSLSAVDDA RRVAQKLDIP FYVLNFRDSF KRNVIDYFVD EYIQGRTPNP CIACNKYLKF DELLQKAKGI GADYVATGHY AKIEERDGRF QLIRSKDDRK DQTYALYNLT QEQLEHTLMP CGEFTKDKIR EIAKEIGLDV HNKKDSEEIC FIPDNNHGRY ICEAAPNKVR PGNFVDKYGN VLGKHKGIVY YTIGQRKGLG LALGRPVFVT DINPVTNTVV VGPEEDIFKT DLVCKDINFI SIDKLEGPME VEAKIRYSAR PAKATISPME NGRVKVSFED KQRAITKGQS VVFYKDDLVV GGGIIESLL
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