Gene CPF_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2001 
Symbolgmk 
ID4201124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2240603 
End bp2241253 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content30% 
IMG OID638082870 
Productguanylate kinase 
Protein accessionYP_696434 
Protein GI110798787 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AGATACATAA GGATAATAGA GGTGTATTAA TAGTTATTTC TGGTCCTTCA 
GGTGCAGGTA AGGGAACTAT TTGTAAAGCC TTATTAGAAA AACACGATGA TATATTCATA 
TCAGTTTCTG CTACTACTAG AAATCCTAGA GTAGGAGAAG TTGATGGAGT TAATTATCAT 
TTCTTAACAA AAGAAGAATT TAAACAAAGA ATAGCAGAGG ATGATTTCCT TGAGCATGCT 
GAAGTATATG GAAATTATTA TGGAACTCCT AAATCAAGTG TTGAAAAAAT GCTTGATGAA 
GGAAAAAACG TAATATTAGA AATAGATATA CAAGGTGCTT TAAAAGTTAA GGAAAAGGCT 
ACTGATGGAG TATTTATCTT TATATTACCT CCTTCAATGG AAGAGCTTAA GCAAAGAATA 
ATAAAAAGAG GTAGCGAAAC TCCAGAAAGT TTAATGACTA GATTTAAGTC AGCTTATAAA 
GAAATTAATT ATGTGTCAAA ATACAATTAT GCAGTAGTTA ACGATAATGT AGAAGATGCA 
GTAAAGAAAA TAGAAGCTAT ATTATTAGCA GAAAAATGTA GAGTAGATAG ATTAAAAGAA 
AACTTATTAG AGTCAAAGGA GGACGAAATG CATGAACAAC TCTATGATTA A
 
Protein sequence
MMNKIHKDNR GVLIVISGPS GAGKGTICKA LLEKHDDIFI SVSATTRNPR VGEVDGVNYH 
FLTKEEFKQR IAEDDFLEHA EVYGNYYGTP KSSVEKMLDE GKNVILEIDI QGALKVKEKA 
TDGVFIFILP PSMEELKQRI IKRGSETPES LMTRFKSAYK EINYVSKYNY AVVNDNVEDA 
VKKIEAILLA EKCRVDRLKE NLLESKEDEM HEQLYD