Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1996 |
Symbol | fmt |
ID | 4203921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2235577 |
End bp | 2236506 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082865 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_696429 |
Protein GI | 110800829 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG TATTTATGGG AACACCAGAT TTTGCTGTTC CATCATTAAA GAGCTTAATA AATGAATTTG GAGTAGAAGC TGTTTTTACT CAACCAGATA GACCAAAGGG AAGAGGAAAG AAATTAGGTA TGTCACCTGT AAAGGAAGTT GCTTTAGAAC ACAACATACC AGTTTATCAA CCTCTAAGAT TAAAAAATGA ACCAGAAACT ATAGAAGAAT TAAAAAGTAT GGAGCCAGAC TTTATAATAG TAGTAGCTTT TGGTCAGATA TTACCTAAAG AGGTTTTAGA TATTCCTAAG TATGGATGTA TCAATCTACA TGCGTCATTA CTTCCTAAAT TTAGAGGAGC AGCACCTTTA AACTGGAGTA TAATCAAAGG AGAAAAGGTA ACAGGAAATA CAACTATGCT TATGGATGTA GGACTTGATA CTGGAGATAT GCTTTTAAAA GATGAAGTAG AAATAACTGA TAATATGACT GCAGGAGAAT TACATGATAT TTTAATGGAA AGAGGAGGAG AGTTATTAGT TAGAACTATA AAGGGCATAC TTAATAATGA AATAACTCCA GAAAAACAAA ATGAAGAAGA AACATGTTAT GCTTCAATGC TTAATAAAGA AATAGCTAAA ATTGATTGGT CTCTTTCAGC ACAGGATATT CATAATTTAG TTAGAGGATT AAATCCGTGG CCTGTAGCTT TAACTTCATA TGATGATATT ACAATGAAAG TTCATCAAAC TAGAGTTGAA AAAGGGGATA GCAATAAAGA ACCAGGAACT ATAATAGCTG TAGATAAAAC AGGAATTAAG GTTTCAACAG GCAAAGATAT ACTTGTTATA GAAAAATTAC AGTTTCCAAA TAGCAAGCAA CTATTTGTAG AACAATTTAT AAATGGAAAC TCAGTAGAAA TAGGTAAAGT TTTAAAATAA
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Protein sequence | MKIVFMGTPD FAVPSLKSLI NEFGVEAVFT QPDRPKGRGK KLGMSPVKEV ALEHNIPVYQ PLRLKNEPET IEELKSMEPD FIIVVAFGQI LPKEVLDIPK YGCINLHASL LPKFRGAAPL NWSIIKGEKV TGNTTMLMDV GLDTGDMLLK DEVEITDNMT AGELHDILME RGGELLVRTI KGILNNEITP EKQNEEETCY ASMLNKEIAK IDWSLSAQDI HNLVRGLNPW PVALTSYDDI TMKVHQTRVE KGDSNKEPGT IIAVDKTGIK VSTGKDILVI EKLQFPNSKQ LFVEQFINGN SVEIGKVLK
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