| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1992 |
|---|
| Symbol | |
|---|
| ID | 4201903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2231718 |
|---|
| End bp | 2232437 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082861 |
|---|
| Product | protein phosphatase 2C family protein |
|---|
| Protein accession | YP_696425 |
|---|
| Protein GI | 110801302 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAT TTGTAACAGA TAAAGGAAAT GTTAGAGAGT TAAACGAAGA TTTTTTATCT
TATTCTAGAG AAGATGAATT TTCAATATAT GTAGTTGGTG ATGGAATGGG TGGACATAAT
GCTGGGGAAG TAGCTAGTAA AAGAGCTGTG GAAAGCATTA TTTGTTTTGT TAAAGAAAAT
TTCGGTGTTA TACCATTAGA TAATCTTTTA AAAGATGCAA TTTTACATGC TAATAGTAAA
ATATATAGTA TGAGCCAAGA AAGTTCTGGT TTATCTGGTA TGGGTACAAC AATAACAGCT
ATATTAGAGG TTAAAAACAT AGTTTATATT GCCAATGTTG GTGATAGTGC TTGTTTTGGT
ATTAATGAAA ATGGAATAAA AAAATTAACA AAGGATCATT CCTTAGTTCA AGAACTTGTT
GATAGTGGTT GCATTACAGA GGGGGAAGCT AAAAATCATC CAAGAAAAAA TGTAATAACT
AGAGCTATTG GAACTAATTC AAATGTTGAT GTTGATGTCT TTAAGGTTGA CAGACATGAA
TATAAGGCAT ATTTACTTTG TACAGATGGA TTAAGTAATG ATGTTGATGA GGATGAAATT
TGGAAAAAAG TAATTAAATC TAATGATTTT GATAAAGCAT GCAATGAATT AGTTGAAATG
GCTAAAGCAA GGGGAGGAAA GGATAATATT ACAGTGTTAG TTTTTGGAGG AGAGAAATAG
|
|---|
| Protein sequence | MLGFVTDKGN VRELNEDFLS YSREDEFSIY VVGDGMGGHN AGEVASKRAV ESIICFVKEN
FGVIPLDNLL KDAILHANSK IYSMSQESSG LSGMGTTITA ILEVKNIVYI ANVGDSACFG
INENGIKKLT KDHSLVQELV DSGCITEGEA KNHPRKNVIT RAIGTNSNVD VDVFKVDRHE
YKAYLLCTDG LSNDVDEDEI WKKVIKSNDF DKACNELVEM AKARGGKDNI TVLVFGGEK
|
|---|
| |